Protein–RNA interactions for Protein: P03372

ESR1, Estrogen receptor, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1P03372 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.81■■□□□ 1.08
ESR1P03372 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ESR1P03372 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.81■■□□□ 1.08
ESR1P03372 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.81■■□□□ 1.08
ESR1P03372 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 AC127496.7-201ENST00000625110 1798 ntBASIC21.81■■□□□ 1.08
ESR1P03372 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ESR1P03372 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ESR1P03372 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ESR1P03372 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ESR1P03372 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ESR1P03372 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.8■■□□□ 1.08
ESR1P03372 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.8■■□□□ 1.08
ESR1P03372 MIR4466-201ENST00000606121 54 ntBASIC21.8■■□□□ 1.08
ESR1P03372 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.8■■□□□ 1.08
ESR1P03372 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ESR1P03372 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ESR1P03372 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.8■■□□□ 1.08
ESR1P03372 GUSBP5-202ENST00000510805 1989 ntBASIC21.79■■□□□ 1.08
ESR1P03372 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.79■■□□□ 1.08
ESR1P03372 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ESR1P03372 AC131281.2-201ENST00000520478 145 ntBASIC21.79■■□□□ 1.08
ESR1P03372 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ESR1P03372 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ESR1P03372 pRNA.6-201ENST00000610482 90 ntBASIC21.79■■□□□ 1.08
ESR1P03372 pRNA.5-201ENST00000612139 90 ntBASIC21.79■■□□□ 1.08
ESR1P03372 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.79■■□□□ 1.08
ESR1P03372 pRNA.11-201ENST00000618423 90 ntBASIC21.79■■□□□ 1.08
ESR1P03372 pRNA.13-201ENST00000619112 90 ntBASIC21.79■■□□□ 1.08
ESR1P03372 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.79■■□□□ 1.08
ESR1P03372 AC087742.1-201ENST00000575880 1738 ntBASIC21.79■■□□□ 1.08
ESR1P03372 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ESR1P03372 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ESR1P03372 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.79■■□□□ 1.08
ESR1P03372 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ESR1P03372 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ESR1P03372 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.78■■□□□ 1.08
ESR1P03372 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ESR1P03372 LINC01960-201ENST00000563759 1884 ntBASIC21.78■■□□□ 1.08
ESR1P03372 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ESR1P03372 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.78■■□□□ 1.08
ESR1P03372 AC133637.1-201ENST00000624115 1537 ntBASIC21.78■■□□□ 1.08
ESR1P03372 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ESR1P03372 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.77■■□□□ 1.08
ESR1P03372 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ESR1P03372 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ESR1P03372 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
ESR1P03372 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ESR1P03372 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
ESR1P03372 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.77■■□□□ 1.07
ESR1P03372 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ESR1P03372 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ESR1P03372 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ESR1P03372 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ESR1P03372 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ESR1P03372 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.76■■□□□ 1.07
ESR1P03372 MIR3181-201ENST00000578512 73 ntBASIC21.76■■□□□ 1.07
ESR1P03372 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ESR1P03372 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ESR1P03372 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.75■■□□□ 1.07
ESR1P03372 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.75■■□□□ 1.07
ESR1P03372 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.75■■□□□ 1.07
ESR1P03372 DUX4L19-201ENST00000557448 1267 ntBASIC21.75■■□□□ 1.07
ESR1P03372 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.75■■□□□ 1.07
ESR1P03372 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ESR1P03372 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.75■■□□□ 1.07
ESR1P03372 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ESR1P03372 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ESR1P03372 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ESR1P03372 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.74■■□□□ 1.07
ESR1P03372 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ESR1P03372 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ESR1P03372 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ESR1P03372 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ESR1P03372 AC242852.2-201ENST00000615738 1807 ntBASIC21.73■■□□□ 1.07
ESR1P03372 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ESR1P03372 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ESR1P03372 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ESR1P03372 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms