Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
PCDHGC3Q9UN70 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.35
PCDHGC3Q9UN70 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 AC004687.1-201ENST00000579003 1625 ntBASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 pRNA.6-201ENST00000610482 90 ntBASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 pRNA.5-201ENST00000612139 90 ntBASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 pRNA.11-201ENST00000618423 90 ntBASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 pRNA.13-201ENST00000619112 90 ntBASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGC3Q9UN70 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGC3Q9UN70 ESRRAP2-201ENST00000418437 1549 ntBASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 MIR3181-201ENST00000578512 73 ntBASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 AC133637.1-201ENST00000624115 1537 ntBASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGC3Q9UN70 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGC3Q9UN70 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 DUX4L19-201ENST00000557448 1267 ntBASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.41■■□□□ 1.34
PCDHGC3Q9UN70 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 AL136116.3-201ENST00000402907 1138 ntBASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGC3Q9UN70 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDHGC3Q9UN70 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 AL138724.1-201ENST00000606771 1088 ntBASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGC3Q9UN70 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 AC087742.1-201ENST00000575880 1738 ntBASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 AC233723.2-201ENST00000623798 2106 ntBASIC23.38■■□□□ 1.33
PCDHGC3Q9UN70 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 SYT6-210ENST00000641643 1587 ntBASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 SERBP1P1-201ENST00000396021 1160 ntBASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms