Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PARPBPQ9NWS1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 SERBP1P1-201ENST00000396021 1160 ntBASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PARPBPQ9NWS1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 AL139246.5-201ENST00000606645 996 ntBASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 AL136162.1-201ENST00000607711 1078 ntBASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.71■□□□□ 0.75
PARPBPQ9NWS1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 AC135279.3-201ENST00000610945 1311 ntBASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PARPBPQ9NWS1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 PBX2P1-201ENST00000493219 1291 ntBASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.69■□□□□ 0.74
PARPBPQ9NWS1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 AC106739.1-201ENST00000617035 715 ntBASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PARPBPQ9NWS1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 AC133637.1-201ENST00000624115 1537 ntBASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 AC136469.2-201ENST00000623944 1028 ntBASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
PARPBPQ9NWS1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 208.1 ms