Protein–RNA interactions for Protein: Q9H8X3

LINC00574, Putative uncharacterized protein LINC00574, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00574Q9H8X3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00574Q9H8X3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 MIR4466-201ENST00000606121 54 ntBASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00574Q9H8X3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
LINC00574Q9H8X3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 AC006455.2-201ENST00000429931 906 ntBASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00574Q9H8X3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 AL117328.2-201ENST00000624617 1940 ntBASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 AC004687.1-201ENST00000579003 1625 ntBASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 MIR3181-201ENST00000578512 73 ntBASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00574Q9H8X3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 AC131281.2-201ENST00000520478 145 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 AL138724.1-201ENST00000606771 1088 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 pRNA.6-201ENST00000610482 90 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 pRNA.5-201ENST00000612139 90 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 pRNA.11-201ENST00000618423 90 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 pRNA.13-201ENST00000619112 90 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 AC133637.1-201ENST00000624115 1537 ntBASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC00574Q9H8X3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 DUX4L19-201ENST00000557448 1267 ntBASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 CA15P2-201ENST00000611168 834 ntBASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00574Q9H8X3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms