Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VCX3BQ9H321 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.06■□□□□ 0.96
VCX3BQ9H321 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.05■□□□□ 0.96
VCX3BQ9H321 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCX3BQ9H321 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCX3BQ9H321 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VCX3BQ9H321 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.05■□□□□ 0.96
VCX3BQ9H321 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.05■□□□□ 0.96
VCX3BQ9H321 AC021231.2-201ENST00000594613 730 ntBASIC21.05■□□□□ 0.96
VCX3BQ9H321 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.05■□□□□ 0.96
VCX3BQ9H321 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
VCX3BQ9H321 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VCX3BQ9H321 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VCX3BQ9H321 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.04■□□□□ 0.96
VCX3BQ9H321 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VCX3BQ9H321 FAM99A-202ENST00000538190 1989 ntBASIC21.03■□□□□ 0.96
VCX3BQ9H321 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.03■□□□□ 0.96
VCX3BQ9H321 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VCX3BQ9H321 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 AC079630.1-202ENST00000618127 1840 ntBASIC21.02■□□□□ 0.96
VCX3BQ9H321 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
VCX3BQ9H321 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VCX3BQ9H321 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VCX3BQ9H321 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VCX3BQ9H321 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
VCX3BQ9H321 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.02■□□□□ 0.95
VCX3BQ9H321 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VCX3BQ9H321 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
VCX3BQ9H321 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VCX3BQ9H321 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
VCX3BQ9H321 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VCX3BQ9H321 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCX3BQ9H321 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCX3BQ9H321 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VCX3BQ9H321 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VCX3BQ9H321 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCX3BQ9H321 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.01■□□□□ 0.95
VCX3BQ9H321 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VCX3BQ9H321 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCX3BQ9H321 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VCX3BQ9H321 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VCX3BQ9H321 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VCX3BQ9H321 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VCX3BQ9H321 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 AC080038.3-201ENST00000623346 1952 ntBASIC20.99■□□□□ 0.95
VCX3BQ9H321 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms