Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX6-2Q9C056 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NKX6-2Q9C056 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NKX6-2Q9C056 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.85■□□□□ 0.45
NKX6-2Q9C056 AL020996.1-203ENST00000536896 2307 ntBASIC17.84■□□□□ 0.45
NKX6-2Q9C056 AC139530.1-201ENST00000575312 1977 ntBASIC17.84■□□□□ 0.45
NKX6-2Q9C056 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NKX6-2Q9C056 HLA-L-211ENST00000482052 1765 ntBASIC17.84■□□□□ 0.45
NKX6-2Q9C056 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-2Q9C056 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-2Q9C056 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-2Q9C056 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NKX6-2Q9C056 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 AL162393.1-201ENST00000437852 946 ntBASIC17.83■□□□□ 0.44
NKX6-2Q9C056 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NKX6-2Q9C056 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms