Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 C1orf229-201ENST00000623686 2258 ntBASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 LINC01529-204ENST00000636474 1715 ntBASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIMC1Q8NDZ2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 AC006455.2-201ENST00000429931 906 ntBASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SIMC1Q8NDZ2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.78■□□□□ 0.92
SIMC1Q8NDZ2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 FP325331.1-202ENST00000623531 1380 ntBASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 AC099791.2-201ENST00000605725 427 ntBASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SIMC1Q8NDZ2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIMC1Q8NDZ2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SIMC1Q8NDZ2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 DUX4L4-201ENST00000566884 1269 ntBASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SIMC1Q8NDZ2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.75■□□□□ 0.91
SIMC1Q8NDZ2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.74■□□□□ 0.91
SIMC1Q8NDZ2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms