Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
LTBP4Q8N2S1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LTBP4Q8N2S1 AC142381.4-202ENST00000563973 229 ntBASIC31.55■■■□□ 2.64
LTBP4Q8N2S1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LTBP4Q8N2S1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
LTBP4Q8N2S1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 USP36-216ENST00000589424 970 ntTSL 5 BASIC31.53■■■□□ 2.64
LTBP4Q8N2S1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 UNC93B4-201ENST00000505679 747 ntBASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LTBP4Q8N2S1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
LTBP4Q8N2S1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
LTBP4Q8N2S1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 MIR4758-201ENST00000577688 71 ntBASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LTBP4Q8N2S1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LTBP4Q8N2S1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
LTBP4Q8N2S1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LTBP4Q8N2S1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 AC073912.3-201ENST00000624414 853 ntBASIC31.49■■■□□ 2.63
LTBP4Q8N2S1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC31.48■■■□□ 2.63
LTBP4Q8N2S1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.48■■■□□ 2.63
LTBP4Q8N2S1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
LTBP4Q8N2S1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.48■■■□□ 2.63
LTBP4Q8N2S1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.48■■■□□ 2.63
LTBP4Q8N2S1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
LTBP4Q8N2S1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LTBP4Q8N2S1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC31.47■■■□□ 2.63
LTBP4Q8N2S1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
LTBP4Q8N2S1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
LTBP4Q8N2S1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LTBP4Q8N2S1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 AC079140.4-201ENST00000507448 529 ntBASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 ESRRAP1-201ENST00000400596 1257 ntBASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 AC083880.1-201ENST00000608266 535 ntBASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.46■■■□□ 2.63
LTBP4Q8N2S1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.45■■■□□ 2.63
LTBP4Q8N2S1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
LTBP4Q8N2S1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
LTBP4Q8N2S1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
LTBP4Q8N2S1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 AC008550.1-201ENST00000511500 884 ntBASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.45■■■□□ 2.62
LTBP4Q8N2S1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 MYCNOS-205ENST00000641950 531 ntBASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.44■■■□□ 2.62
LTBP4Q8N2S1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms