Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VMA21Q3ZAQ7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VMA21Q3ZAQ7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
VMA21Q3ZAQ7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VMA21Q3ZAQ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VMA21Q3ZAQ7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 AC009086.3-201ENST00000623486 1008 ntBASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VMA21Q3ZAQ7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 MIR6724-1-201ENST00000616420 92 ntBASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 MIR6724-2-201ENST00000616483 92 ntBASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 MIR6724-4-201ENST00000617390 92 ntBASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 MIR6724-3-201ENST00000622482 92 ntBASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.82■□□□□ 0.44
VMA21Q3ZAQ7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 AC009102.2-201ENST00000606772 1639 ntBASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 AC079834.2-201ENST00000609776 1949 ntBASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 DUX4L4-201ENST00000566884 1269 ntBASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VMA21Q3ZAQ7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VMA21Q3ZAQ7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 KRT16P3-201ENST00000439127 1283 ntBASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.79■□□□□ 0.44
VMA21Q3ZAQ7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 UNC93B8-201ENST00000511903 705 ntBASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VMA21Q3ZAQ7 AL035685.1-201ENST00000636663 812 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms