Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.16■■□□□ 1.62
USP11P51784 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
USP11P51784 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
USP11P51784 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.15■■□□□ 1.62
USP11P51784 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
USP11P51784 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.15■■□□□ 1.62
USP11P51784 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
USP11P51784 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.15■■□□□ 1.62
USP11P51784 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USP11P51784 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USP11P51784 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USP11P51784 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
USP11P51784 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USP11P51784 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USP11P51784 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
USP11P51784 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
USP11P51784 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.14■■□□□ 1.62
USP11P51784 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
USP11P51784 OR2I1P-207ENST00000453522 948 ntBASIC25.14■■□□□ 1.62
USP11P51784 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
USP11P51784 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.14■■□□□ 1.62
USP11P51784 AC004687.1-201ENST00000579003 1625 ntBASIC25.14■■□□□ 1.61
USP11P51784 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
USP11P51784 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
USP11P51784 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
USP11P51784 BX842568.3-201ENST00000418104 571 ntBASIC25.13■■□□□ 1.61
USP11P51784 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
USP11P51784 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
USP11P51784 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USP11P51784 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
USP11P51784 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.12■■□□□ 1.61
USP11P51784 AL136967.2-201ENST00000623968 743 ntBASIC25.12■■□□□ 1.61
USP11P51784 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
USP11P51784 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
USP11P51784 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
USP11P51784 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
USP11P51784 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
USP11P51784 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
USP11P51784 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.11■■□□□ 1.61
USP11P51784 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.11■■□□□ 1.61
USP11P51784 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.11■■□□□ 1.61
USP11P51784 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.11■■□□□ 1.61
USP11P51784 AC233992.3-201ENST00000607491 485 ntBASIC25.11■■□□□ 1.61
USP11P51784 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USP11P51784 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USP11P51784 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USP11P51784 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
USP11P51784 MIR939-201ENST00000401314 82 ntBASIC25.1■■□□□ 1.61
USP11P51784 AP001330.3-201ENST00000520123 633 ntBASIC25.1■■□□□ 1.61
USP11P51784 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.1■■□□□ 1.61
USP11P51784 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP11P51784 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
USP11P51784 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
USP11P51784 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
USP11P51784 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP11P51784 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP11P51784 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.09■■□□□ 1.61
USP11P51784 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP11P51784 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP11P51784 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.09■■□□□ 1.61
USP11P51784 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP11P51784 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
USP11P51784 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
USP11P51784 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
USP11P51784 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
USP11P51784 SLC47A1P1-202ENST00000449666 945 ntBASIC25.08■■□□□ 1.61
USP11P51784 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
USP11P51784 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
USP11P51784 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
USP11P51784 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
USP11P51784 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.08■■□□□ 1.6
USP11P51784 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
USP11P51784 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
USP11P51784 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.07■■□□□ 1.6
USP11P51784 AC142381.2-201ENST00000566120 298 ntBASIC25.07■■□□□ 1.6
USP11P51784 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP11P51784 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.07■■□□□ 1.6
USP11P51784 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
USP11P51784 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP11P51784 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP11P51784 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.07■■□□□ 1.6
USP11P51784 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP11P51784 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
USP11P51784 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
USP11P51784 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.06■■□□□ 1.6
USP11P51784 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USP11P51784 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
USP11P51784 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
USP11P51784 AC027682.1-201ENST00000562846 899 ntBASIC25.06■■□□□ 1.6
USP11P51784 AF213884.3-201ENST00000563833 479 ntBASIC25.06■■□□□ 1.6
USP11P51784 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USP11P51784 AC010525.1-201ENST00000585559 441 ntBASIC25.06■■□□□ 1.6
USP11P51784 AC008764.7-201ENST00000593779 1081 ntBASIC25.06■■□□□ 1.6
USP11P51784 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.06■■□□□ 1.6
USP11P51784 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
USP11P51784 RASA4CP-201ENST00000424092 1398 ntBASIC25.05■■□□□ 1.6
USP11P51784 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP11P51784 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.05■■□□□ 1.6
USP11P51784 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP11P51784 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms