Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNFP41002 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CCNFP41002 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
CCNFP41002 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNFP41002 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNFP41002 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNFP41002 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNFP41002 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CCNFP41002 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNFP41002 MTDHP2-201ENST00000601468 714 ntBASIC22.27■■□□□ 1.16
CCNFP41002 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNFP41002 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNFP41002 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CCNFP41002 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNFP41002 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.26■■□□□ 1.15
CCNFP41002 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNFP41002 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCNFP41002 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.26■■□□□ 1.15
CCNFP41002 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNFP41002 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNFP41002 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 AL353803.4-201ENST00000565882 1934 ntBASIC22.25■■□□□ 1.15
CCNFP41002 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNFP41002 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 GUSBP5-201ENST00000418136 578 ntBASIC22.25■■□□□ 1.15
CCNFP41002 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CCNFP41002 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CCNFP41002 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.25■■□□□ 1.15
CCNFP41002 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNFP41002 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CCNFP41002 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNFP41002 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNFP41002 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CCNFP41002 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
CCNFP41002 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNFP41002 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNFP41002 TSPY9P-201ENST00000440215 945 ntBASIC22.24■■□□□ 1.15
CCNFP41002 TSPY11P-201ENST00000442607 1045 ntBASIC22.24■■□□□ 1.15
CCNFP41002 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.24■■□□□ 1.15
CCNFP41002 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.24■■□□□ 1.15
CCNFP41002 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.24■■□□□ 1.15
CCNFP41002 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CCNFP41002 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNFP41002 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNFP41002 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNFP41002 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCNFP41002 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
CCNFP41002 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
CCNFP41002 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CCNFP41002 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
CCNFP41002 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CCNFP41002 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.23■■□□□ 1.15
CCNFP41002 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 AC010997.5-201ENST00000609182 354 ntBASIC22.23■■□□□ 1.15
CCNFP41002 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNFP41002 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNFP41002 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.22■■□□□ 1.15
CCNFP41002 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.22■■□□□ 1.15
CCNFP41002 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.22■■□□□ 1.15
CCNFP41002 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNFP41002 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNFP41002 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
CCNFP41002 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.22■■□□□ 1.15
CCNFP41002 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNFP41002 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNFP41002 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CCNFP41002 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNFP41002 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNFP41002 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNFP41002 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNFP41002 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNFP41002 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNFP41002 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNFP41002 AC007375.3-201ENST00000600936 2314 ntBASIC22.21■■□□□ 1.15
CCNFP41002 AC092053.2-201ENST00000640557 1818 ntBASIC22.21■■□□□ 1.15
CCNFP41002 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNFP41002 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms