Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCK1P16333 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCK1P16333 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
NCK1P16333 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
NCK1P16333 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.89■□□□□ 0.94
NCK1P16333 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCK1P16333 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCK1P16333 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.89■□□□□ 0.93
NCK1P16333 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCK1P16333 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCK1P16333 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCK1P16333 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NCK1P16333 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.89■□□□□ 0.93
NCK1P16333 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCK1P16333 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.89■□□□□ 0.93
NCK1P16333 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCK1P16333 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.88■□□□□ 0.93
NCK1P16333 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCK1P16333 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCK1P16333 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCK1P16333 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCK1P16333 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
NCK1P16333 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.88■□□□□ 0.93
NCK1P16333 AC120024.1-201ENST00000562672 995 ntBASIC20.88■□□□□ 0.93
NCK1P16333 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCK1P16333 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.88■□□□□ 0.93
NCK1P16333 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.87■□□□□ 0.93
NCK1P16333 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCK1P16333 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCK1P16333 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.87■□□□□ 0.93
NCK1P16333 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NCK1P16333 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NCK1P16333 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCK1P16333 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.87■□□□□ 0.93
NCK1P16333 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NCK1P16333 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.87■□□□□ 0.93
NCK1P16333 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCK1P16333 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCK1P16333 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NCK1P16333 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
NCK1P16333 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
NCK1P16333 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NCK1P16333 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCK1P16333 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCK1P16333 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCK1P16333 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCK1P16333 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NCK1P16333 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.86■□□□□ 0.93
NCK1P16333 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.86■□□□□ 0.93
NCK1P16333 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCK1P16333 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
NCK1P16333 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NCK1P16333 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.85■□□□□ 0.93
NCK1P16333 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 KRT18P60-201ENST00000312876 1297 ntBASIC20.85■□□□□ 0.93
NCK1P16333 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NCK1P16333 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.85■□□□□ 0.93
NCK1P16333 AC022616.5-201ENST00000518796 181 ntBASIC20.85■□□□□ 0.93
NCK1P16333 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 AC026310.3-201ENST00000625186 2373 ntBASIC20.85■□□□□ 0.93
NCK1P16333 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCK1P16333 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
NCK1P16333 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NCK1P16333 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NCK1P16333 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NCK1P16333 AC004448.1-201ENST00000458332 883 ntBASIC20.84■□□□□ 0.93
NCK1P16333 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NCK1P16333 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.84■□□□□ 0.93
NCK1P16333 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.84■□□□□ 0.93
NCK1P16333 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCK1P16333 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCK1P16333 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCK1P16333 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCK1P16333 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCK1P16333 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.83■□□□□ 0.93
NCK1P16333 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
NCK1P16333 DUX4L18-201ENST00000553347 1267 ntBASIC20.83■□□□□ 0.93
NCK1P16333 AC019171.1-201ENST00000601251 1056 ntBASIC20.83■□□□□ 0.93
NCK1P16333 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCK1P16333 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NCK1P16333 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCK1P16333 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCK1P16333 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms