Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
SAA2-SAA4A0A096LPE2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SAA2-SAA4A0A096LPE2 C17orf82-201ENST00000623772 1530 ntBASIC18.08■□□□□ 0.49
SAA2-SAA4A0A096LPE2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SAA2-SAA4A0A096LPE2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.08■□□□□ 0.49
SAA2-SAA4A0A096LPE2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 DUX4L4-201ENST00000566884 1269 ntBASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ESRRAP2-201ENST00000418437 1549 ntBASIC18.08■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC009086.3-201ENST00000623486 1008 ntBASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA2-SAA4A0A096LPE2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 GUSBP5-201ENST00000418136 578 ntBASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.06■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.05■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 EP400NL-214ENST00000641289 2402 ntBASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SAA2-SAA4A0A096LPE2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AL117332.1-201ENST00000622628 974 ntBASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC127496.7-201ENST00000625110 1798 ntBASIC18.02■□□□□ 0.48
SAA2-SAA4A0A096LPE2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SAA2-SAA4A0A096LPE2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.02■□□□□ 0.48
SAA2-SAA4A0A096LPE2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SAA2-SAA4A0A096LPE2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SAA2-SAA4A0A096LPE2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.02■□□□□ 0.48
SAA2-SAA4A0A096LPE2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms