Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.41■■□□□ 1.5
TRIM65Q6PJ69 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.41■■□□□ 1.5
TRIM65Q6PJ69 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM65Q6PJ69 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM65Q6PJ69 AL137060.1-201ENST00000618151 2648 ntBASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM65Q6PJ69 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM65Q6PJ69 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM65Q6PJ69 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM65Q6PJ69 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM65Q6PJ69 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.39■■□□□ 1.5
TRIM65Q6PJ69 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM65Q6PJ69 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM65Q6PJ69 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
TRIM65Q6PJ69 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM65Q6PJ69 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 Z92544.1-202ENST00000571933 1220 ntBASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 MIR6722-201ENST00000617286 78 ntBASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 AC242852.2-201ENST00000615738 1807 ntBASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 AC079630.1-202ENST00000618127 1840 ntBASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
TRIM65Q6PJ69 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.36■■□□□ 1.49
TRIM65Q6PJ69 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.35■■□□□ 1.49
TRIM65Q6PJ69 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 AL451085.2-201ENST00000605085 799 ntBASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM65Q6PJ69 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 AC009299.2-201ENST00000482477 511 ntBASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 AC092028.1-203ENST00000608262 953 ntBASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM65Q6PJ69 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRIM65Q6PJ69 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRIM65Q6PJ69 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms