Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMC4P56277 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CMC4P56277 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CMC4P56277 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CMC4P56277 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.55■□□□□ 0.24
CMC4P56277 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CMC4P56277 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.55■□□□□ 0.24
CMC4P56277 AL353803.4-201ENST00000565882 1934 ntBASIC16.55■□□□□ 0.24
CMC4P56277 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CMC4P56277 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CMC4P56277 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CMC4P56277 AC135279.3-201ENST00000610945 1311 ntBASIC16.54■□□□□ 0.24
CMC4P56277 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMC4P56277 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.54■□□□□ 0.24
CMC4P56277 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMC4P56277 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CMC4P56277 SERBP1P1-201ENST00000396021 1160 ntBASIC16.54■□□□□ 0.24
CMC4P56277 PBX2P1-201ENST00000493219 1291 ntBASIC16.54■□□□□ 0.24
CMC4P56277 AC136469.2-201ENST00000623944 1028 ntBASIC16.54■□□□□ 0.24
CMC4P56277 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CMC4P56277 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMC4P56277 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.54■□□□□ 0.24
CMC4P56277 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CMC4P56277 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CMC4P56277 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CMC4P56277 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.53■□□□□ 0.24
CMC4P56277 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CMC4P56277 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.53■□□□□ 0.24
CMC4P56277 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CMC4P56277 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.53■□□□□ 0.24
CMC4P56277 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 AC106739.1-201ENST00000617035 715 ntBASIC16.53■□□□□ 0.24
CMC4P56277 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.53■□□□□ 0.24
CMC4P56277 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CMC4P56277 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CMC4P56277 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CMC4P56277 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.52■□□□□ 0.24
CMC4P56277 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.52■□□□□ 0.24
CMC4P56277 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CMC4P56277 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CMC4P56277 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.52■□□□□ 0.24
CMC4P56277 AC133637.1-201ENST00000624115 1537 ntBASIC16.52■□□□□ 0.24
CMC4P56277 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CMC4P56277 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CMC4P56277 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.52■□□□□ 0.24
CMC4P56277 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.52■□□□□ 0.24
CMC4P56277 AC068587.7-201ENST00000641602 218 ntBASIC16.52■□□□□ 0.24
CMC4P56277 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CMC4P56277 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CMC4P56277 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CMC4P56277 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.52■□□□□ 0.23
CMC4P56277 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.52■□□□□ 0.23
CMC4P56277 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CMC4P56277 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CMC4P56277 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.51■□□□□ 0.23
CMC4P56277 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.51■□□□□ 0.23
CMC4P56277 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CMC4P56277 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CMC4P56277 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 EDA-201ENST00000338901 1233 ntBASIC16.51■□□□□ 0.23
CMC4P56277 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.51■□□□□ 0.23
CMC4P56277 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.51■□□□□ 0.23
CMC4P56277 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CMC4P56277 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CMC4P56277 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CMC4P56277 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CMC4P56277 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CMC4P56277 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CMC4P56277 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 AC006455.2-201ENST00000429931 906 ntBASIC16.5■□□□□ 0.23
CMC4P56277 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
CMC4P56277 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.5■□□□□ 0.23
CMC4P56277 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.5■□□□□ 0.23
CMC4P56277 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CMC4P56277 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.5■□□□□ 0.23
CMC4P56277 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms