Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC103834.1-201ENST00000520383 144 ntBASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV5-3A0A0A0MS03 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV5-3A0A0A0MS03 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV5-3A0A0A0MS03 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.91■□□□□ 0.94
TRBV5-3A0A0A0MS03 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-3A0A0A0MS03 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-3A0A0A0MS03 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-3A0A0A0MS03 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-3A0A0A0MS03 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV5-3A0A0A0MS03 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC137630.3-201ENST00000607245 391 ntBASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV5-3A0A0A0MS03 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV5-3A0A0A0MS03 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV5-3A0A0A0MS03 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV5-3A0A0A0MS03 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 AC103724.3-201ENST00000564481 992 ntBASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-3A0A0A0MS03 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRBV5-3A0A0A0MS03 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-3A0A0A0MS03 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-3A0A0A0MS03 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
TRBV5-3A0A0A0MS03 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.87■□□□□ 0.93
TRBV5-3A0A0A0MS03 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-3A0A0A0MS03 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TRBV5-3A0A0A0MS03 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-3A0A0A0MS03 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-3A0A0A0MS03 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms