Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 AL356740.2-201ENST00000601559 647 ntBASIC20.91■□□□□ 0.94
RNF6Q9Y252 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF6Q9Y252 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RNF6Q9Y252 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.9■□□□□ 0.94
RNF6Q9Y252 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
RNF6Q9Y252 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF6Q9Y252 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
RNF6Q9Y252 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF6Q9Y252 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RNF6Q9Y252 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.89■□□□□ 0.93
RNF6Q9Y252 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF6Q9Y252 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF6Q9Y252 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF6Q9Y252 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 LINC00526-201ENST00000581067 1875 ntBASIC20.89■□□□□ 0.93
RNF6Q9Y252 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF6Q9Y252 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RNF6Q9Y252 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF6Q9Y252 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RNF6Q9Y252 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF6Q9Y252 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF6Q9Y252 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF6Q9Y252 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RNF6Q9Y252 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF6Q9Y252 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF6Q9Y252 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF6Q9Y252 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF6Q9Y252 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF6Q9Y252 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF6Q9Y252 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF6Q9Y252 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF6Q9Y252 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF6Q9Y252 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF6Q9Y252 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF6Q9Y252 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF6Q9Y252 GUSBP5-202ENST00000510805 1989 ntBASIC20.86■□□□□ 0.93
RNF6Q9Y252 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF6Q9Y252 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF6Q9Y252 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.86■□□□□ 0.93
RNF6Q9Y252 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF6Q9Y252 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF6Q9Y252 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
RNF6Q9Y252 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF6Q9Y252 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF6Q9Y252 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF6Q9Y252 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF6Q9Y252 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.85■□□□□ 0.93
RNF6Q9Y252 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF6Q9Y252 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF6Q9Y252 AF131216.4-201ENST00000638924 1588 ntBASIC20.85■□□□□ 0.93
RNF6Q9Y252 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF6Q9Y252 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF6Q9Y252 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms