Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.84■■□□□ 1.41
RCCD1A6NED2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RCCD1A6NED2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RCCD1A6NED2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RCCD1A6NED2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RCCD1A6NED2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RCCD1A6NED2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RCCD1A6NED2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RCCD1A6NED2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RCCD1A6NED2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RCCD1A6NED2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RCCD1A6NED2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RCCD1A6NED2 THA1P-201ENST00000590384 1145 ntBASIC23.82■■□□□ 1.4
RCCD1A6NED2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.82■■□□□ 1.4
RCCD1A6NED2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RCCD1A6NED2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RCCD1A6NED2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.82■■□□□ 1.4
RCCD1A6NED2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RCCD1A6NED2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RCCD1A6NED2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RCCD1A6NED2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RCCD1A6NED2 KRT18P24-201ENST00000344739 1156 ntBASIC23.81■■□□□ 1.4
RCCD1A6NED2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RCCD1A6NED2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.81■■□□□ 1.4
RCCD1A6NED2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RCCD1A6NED2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.81■■□□□ 1.4
RCCD1A6NED2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RCCD1A6NED2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RCCD1A6NED2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RCCD1A6NED2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RCCD1A6NED2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.8■■□□□ 1.4
RCCD1A6NED2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.8■■□□□ 1.4
RCCD1A6NED2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RCCD1A6NED2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RCCD1A6NED2 AC087742.1-201ENST00000575880 1738 ntBASIC23.8■■□□□ 1.4
RCCD1A6NED2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
RCCD1A6NED2 AL137060.1-201ENST00000618151 2648 ntBASIC23.8■■□□□ 1.4
RCCD1A6NED2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RCCD1A6NED2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
RCCD1A6NED2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RCCD1A6NED2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RCCD1A6NED2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RCCD1A6NED2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 NTF6A-201ENST00000591175 560 ntBASIC23.79■■□□□ 1.4
RCCD1A6NED2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RCCD1A6NED2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RCCD1A6NED2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RCCD1A6NED2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RCCD1A6NED2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RCCD1A6NED2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.78■■□□□ 1.4
RCCD1A6NED2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.78■■□□□ 1.4
RCCD1A6NED2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
RCCD1A6NED2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RCCD1A6NED2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RCCD1A6NED2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.78■■□□□ 1.4
RCCD1A6NED2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RCCD1A6NED2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RCCD1A6NED2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RCCD1A6NED2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RCCD1A6NED2 AC004987.1-201ENST00000428627 508 ntBASIC23.77■■□□□ 1.4
RCCD1A6NED2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.77■■□□□ 1.4
RCCD1A6NED2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.77■■□□□ 1.4
RCCD1A6NED2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RCCD1A6NED2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RCCD1A6NED2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.76■■□□□ 1.39
RCCD1A6NED2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RCCD1A6NED2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RCCD1A6NED2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RCCD1A6NED2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RCCD1A6NED2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RCCD1A6NED2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RCCD1A6NED2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RCCD1A6NED2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.75■■□□□ 1.39
RCCD1A6NED2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RCCD1A6NED2 C11orf96-202ENST00000528572 1834 ntBASIC23.75■■□□□ 1.39
RCCD1A6NED2 AC092053.2-201ENST00000640557 1818 ntBASIC23.75■■□□□ 1.39
RCCD1A6NED2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.75■■□□□ 1.39
RCCD1A6NED2 ABHD17AP5-201ENST00000580133 923 ntBASIC23.75■■□□□ 1.39
RCCD1A6NED2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.75■■□□□ 1.39
RCCD1A6NED2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RCCD1A6NED2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RCCD1A6NED2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RCCD1A6NED2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.74■■□□□ 1.39
RCCD1A6NED2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.74■■□□□ 1.39
RCCD1A6NED2 ATP5G2P3-201ENST00000429083 425 ntBASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms