Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV23-1A0A0A0MS06 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRBV23-1A0A0A0MS06 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.71■□□□□ 0.58
TRBV23-1A0A0A0MS06 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV23-1A0A0A0MS06 ABCB10P4-201ENST00000566803 2184 ntBASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 AC131212.1-201ENST00000613771 668 ntBASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV23-1A0A0A0MS06 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV23-1A0A0A0MS06 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV23-1A0A0A0MS06 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV23-1A0A0A0MS06 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV23-1A0A0A0MS06 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.64■□□□□ 0.58
TRBV23-1A0A0A0MS06 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV23-1A0A0A0MS06 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms