Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRBV5-3A0A0A0MS03 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-3A0A0A0MS03 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 AC087742.1-201ENST00000575880 1738 ntBASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 SNX5-217ENST00000606557 1087 ntBASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.02■□□□□ 0.96
TRBV5-3A0A0A0MS03 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.02■□□□□ 0.95
TRBV5-3A0A0A0MS03 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRBV5-3A0A0A0MS03 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 AC144652.1-201ENST00000609974 1624 ntBASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 MIR4508-201ENST00000584178 70 ntBASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-3A0A0A0MS03 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 AC080038.3-201ENST00000623346 1952 ntBASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-3A0A0A0MS03 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 TSPY13P-201ENST00000338964 914 ntBASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 AC092053.2-201ENST00000640557 1818 ntBASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-3A0A0A0MS03 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV5-3A0A0A0MS03 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV5-3A0A0A0MS03 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 C11orf96-202ENST00000528572 1834 ntBASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV5-3A0A0A0MS03 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
TRBV5-3A0A0A0MS03 AC007375.3-201ENST00000600936 2314 ntBASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV5-3A0A0A0MS03 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms