Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV1A0A0A0MS02 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 AC010997.5-201ENST00000609182 354 ntBASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRGV1A0A0A0MS02 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 AC079630.1-202ENST00000618127 1840 ntBASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 AC133561.1-201ENST00000568600 2415 ntBASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRGV1A0A0A0MS02 AC068473.5-201ENST00000616428 2072 ntBASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 DUSP8P3-201ENST00000399571 1760 ntBASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV1A0A0A0MS02 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 AL035685.1-201ENST00000636663 812 ntBASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV1A0A0A0MS02 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV1A0A0A0MS02 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms