Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM9Q9NQV7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM9Q9NQV7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM9Q9NQV7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PRDM9Q9NQV7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM9Q9NQV7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 AC079630.1-202ENST00000618127 1840 ntBASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRDM9Q9NQV7 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.14■□□□□ 0.98
PRDM9Q9NQV7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.14■□□□□ 0.97
PRDM9Q9NQV7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 AC092171.4-201ENST00000609130 632 ntBASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM9Q9NQV7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 AC241377.3-202ENST00000626088 1088 ntBASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 AC241585.3-202ENST00000628937 1088 ntBASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 AC245100.8-202ENST00000629247 1058 ntBASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM9Q9NQV7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM9Q9NQV7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM9Q9NQV7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 LINC01529-204ENST00000636474 1715 ntBASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 DUX4L4-201ENST00000566884 1269 ntBASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 AC099791.2-201ENST00000605725 427 ntBASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM9Q9NQV7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 DUX4L19-201ENST00000557448 1267 ntBASIC21.08■□□□□ 0.97
PRDM9Q9NQV7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms