Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH15P55291 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH15P55291 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CDH15P55291 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH15P55291 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDH15P55291 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH15P55291 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH15P55291 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH15P55291 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH15P55291 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDH15P55291 TSPY13P-201ENST00000338964 914 ntBASIC20.78■□□□□ 0.92
CDH15P55291 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH15P55291 FBXW4P1-201ENST00000426721 2239 ntBASIC20.78■□□□□ 0.92
CDH15P55291 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH15P55291 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH15P55291 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH15P55291 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH15P55291 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH15P55291 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH15P55291 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH15P55291 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH15P55291 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH15P55291 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH15P55291 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH15P55291 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDH15P55291 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH15P55291 AC004987.1-201ENST00000428627 508 ntBASIC20.76■□□□□ 0.91
CDH15P55291 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH15P55291 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH15P55291 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH15P55291 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDH15P55291 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDH15P55291 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH15P55291 AL121603.2-201ENST00000557373 2117 ntBASIC20.75■□□□□ 0.91
CDH15P55291 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH15P55291 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH15P55291 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDH15P55291 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH15P55291 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH15P55291 ATP5G2P3-201ENST00000429083 425 ntBASIC20.75■□□□□ 0.91
CDH15P55291 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
CDH15P55291 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.75■□□□□ 0.91
CDH15P55291 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH15P55291 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH15P55291 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH15P55291 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDH15P55291 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH15P55291 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH15P55291 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.74■□□□□ 0.91
CDH15P55291 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH15P55291 AC007029.1-201ENST00000604183 313 ntBASIC20.74■□□□□ 0.91
CDH15P55291 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH15P55291 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH15P55291 C11orf96-202ENST00000528572 1834 ntBASIC20.74■□□□□ 0.91
CDH15P55291 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH15P55291 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH15P55291 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH15P55291 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH15P55291 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH15P55291 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.73■□□□□ 0.91
CDH15P55291 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDH15P55291 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH15P55291 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH15P55291 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH15P55291 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH15P55291 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.72■□□□□ 0.91
CDH15P55291 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH15P55291 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH15P55291 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH15P55291 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH15P55291 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDH15P55291 AC026310.3-201ENST00000625186 2373 ntBASIC20.71■□□□□ 0.91
CDH15P55291 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH15P55291 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH15P55291 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH15P55291 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH15P55291 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms