Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
HMGCLP35914 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.38■■□□□ 1.17
HMGCLP35914 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.38■■□□□ 1.17
HMGCLP35914 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HMGCLP35914 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCLP35914 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.38■■□□□ 1.17
HMGCLP35914 DUSP8P3-201ENST00000399571 1760 ntBASIC22.38■■□□□ 1.17
HMGCLP35914 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
HMGCLP35914 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.37■■□□□ 1.17
HMGCLP35914 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 SRD5A1P1-201ENST00000442297 786 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 AC241377.3-202ENST00000626088 1088 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 AC241585.3-202ENST00000628937 1088 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 AC245100.8-202ENST00000629247 1058 ntBASIC22.37■■□□□ 1.17
HMGCLP35914 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCLP35914 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.37■■□□□ 1.17
HMGCLP35914 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLP35914 DUX4L4-201ENST00000566884 1269 ntBASIC22.36■■□□□ 1.17
HMGCLP35914 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCLP35914 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
HMGCLP35914 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCLP35914 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCLP35914 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.35■■□□□ 1.17
HMGCLP35914 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HMGCLP35914 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCLP35914 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.35■■□□□ 1.17
HMGCLP35914 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCLP35914 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCLP35914 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLP35914 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLP35914 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCLP35914 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.34■■□□□ 1.17
HMGCLP35914 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCLP35914 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCLP35914 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCLP35914 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLP35914 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
HMGCLP35914 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCLP35914 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.33■■□□□ 1.17
HMGCLP35914 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
HMGCLP35914 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCLP35914 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HMGCLP35914 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
HMGCLP35914 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HMGCLP35914 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HMGCLP35914 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGCLP35914 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCLP35914 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.32■■□□□ 1.16
HMGCLP35914 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCLP35914 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCLP35914 AC092171.4-201ENST00000609130 632 ntBASIC22.31■■□□□ 1.16
HMGCLP35914 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLP35914 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
HMGCLP35914 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.31■■□□□ 1.16
HMGCLP35914 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLP35914 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HMGCLP35914 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HMGCLP35914 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 AL136116.3-201ENST00000402907 1138 ntBASIC22.3■■□□□ 1.16
HMGCLP35914 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCLP35914 AC099791.2-201ENST00000605725 427 ntBASIC22.3■■□□□ 1.16
HMGCLP35914 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.3■■□□□ 1.16
HMGCLP35914 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.3■■□□□ 1.16
HMGCLP35914 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGCLP35914 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLP35914 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
HMGCLP35914 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLP35914 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGCLP35914 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLP35914 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLP35914 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.29■■□□□ 1.16
HMGCLP35914 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HMGCLP35914 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms