Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.312e-11■■■■■ 40.7
MATR3P43243 SAR1B-202ENST00000439578 929 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.522e-11■■■■■ 40.7
MATR3P43243 SAR1B-203ENST00000502286 548 ntTSL 410.8□□□□□ -0.682e-11■■■■■ 40.7
MATR3P43243 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.352e-11■■■■■ 40.7
MATR3P43243 SUCLG1-206ENST00000487809 762 ntTSL 26.61□□□□□ -1.352e-11■■■■■ 40.7
MATR3P43243 SAR1B-207ENST00000505758 670 ntTSL 55.6□□□□□ -1.512e-11■■■■■ 40.7
MATR3P43243 SUCLG1-208ENST00000491123 1073 ntTSL 32.52□□□□□ -2.012e-11■■■■■ 40.7
MATR3P43243 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.979e-8■■■■■ 40.7
MATR3P43243 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.52□□□□□ -1.379e-8■■■■■ 40.7
MATR3P43243 GARS-203ENST00000454308 814 ntTSL 521.79■■□□□ 1.081e-8■■■■■ 40.6
MATR3P43243 GARS-206ENST00000478124 1877 ntTSL 520.4■□□□□ 0.861e-8■■■■■ 40.6
MATR3P43243 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.371e-8■■■■■ 40.6
MATR3P43243 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.11■□□□□ 0.011e-8■■■■■ 40.6
MATR3P43243 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.254e-7■■■■■ 40.6
MATR3P43243 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.534e-7■■■■■ 40.6
MATR3P43243 SPOP-214ENST00000509079 1134 ntTSL 516.4■□□□□ 0.224e-7■■■■■ 40.6
MATR3P43243 SPOP-209ENST00000505581 984 ntTSL 516.4■□□□□ 0.224e-7■■■■■ 40.6
MATR3P43243 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.244e-7■■■■■ 40.6
MATR3P43243 SPOP-202ENST00000393328 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.384e-7■■■■■ 40.6
MATR3P43243 SPOP-216ENST00000509869 779 ntTSL 510.31□□□□□ -0.764e-7■■■■■ 40.6
MATR3P43243 SPOP-208ENST00000504889 400 ntTSL 26.57□□□□□ -1.364e-7■■■■■ 40.6
MATR3P43243 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.283e-6■■■■■ 40.5
MATR3P43243 EML6-207ENST00000491655 471 ntTSL 421.65■■□□□ 1.063e-6■■■■■ 40.5
MATR3P43243 NBPF1-205ENST00000449853 2755 ntTSL 1 (best)20.63■□□□□ 0.896e-15■■■■■ 40.4
MATR3P43243 NBPF1-206ENST00000599069 2752 ntTSL 1 (best)19.57■□□□□ 0.726e-15■■■■■ 40.4
MATR3P43243 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.066e-15■■■■■ 40.4
MATR3P43243 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.276e-15■■■■■ 40.4
MATR3P43243 NBPF1-202ENST00000420513 488 ntTSL 37.25□□□□□ -1.256e-15■■■■■ 40.4
MATR3P43243 AL117329.1-201ENST00000423737 1815 ntTSL 2 BASIC10.26□□□□□ -0.777e-7■■■■■ 40.3
MATR3P43243 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.773e-7■■■■■ 40.2
MATR3P43243 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.753e-7■■■■■ 40.2
MATR3P43243 RABL6-210ENST00000484471 2746 ntTSL 522.22■■□□□ 1.153e-7■■■■■ 40.2
MATR3P43243 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.823e-7■■■■■ 40.2
MATR3P43243 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.733e-7■■■■■ 40.2
MATR3P43243 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC13.91□□□□□ -0.183e-7■■■■■ 40.2
MATR3P43243 WDPCP-207ENST00000409835 2277 ntTSL 1 (best)16.29■□□□□ 0.25e-10■■■■■ 39.9
MATR3P43243 WDPCP-201ENST00000272321 3392 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.395e-10■■■■■ 39.9
MATR3P43243 WDPCP-209ENST00000418148 576 ntTSL 412.28□□□□□ -0.445e-10■■■■■ 39.9
MATR3P43243 WDPCP-208ENST00000417238 2883 ntTSL 211.56□□□□□ -0.565e-10■■■■■ 39.9
MATR3P43243 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.815e-10■■■■■ 39.9
MATR3P43243 WDPCP-217ENST00000493315 1476 ntTSL 1 (best)8.43□□□□□ -1.065e-10■■■■■ 39.9
MATR3P43243 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.95□□□□□ -1.145e-10■■■■■ 39.9
MATR3P43243 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.93■□□□□ 0.621e-7■■■■■ 39.6
MATR3P43243 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-7■■■■■ 39.6
MATR3P43243 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.243e-8■■■■■ 39.6
MATR3P43243 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC13.17□□□□□ -0.33e-8■■■■■ 39.6
MATR3P43243 TAB2-203ENST00000470466 4199 ntTSL 1 (best)7.16□□□□□ -1.261e-7■■■■■ 39.3
MATR3P43243 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.031e-7■■■■■ 39.3
MATR3P43243 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16■□□□□ 0.156e-11■■■■■ 39.3
MATR3P43243 OGFOD1-208ENST00000568172 537 ntTSL 415.35■□□□□ 0.056e-11■■■■■ 39.3
MATR3P43243 OGFOD1-204ENST00000563733 734 ntTSL 214.8□□□□□ -0.046e-11■■■■■ 39.3
MATR3P43243 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.386e-11■■■■■ 39.3
MATR3P43243 OGFOD1-203ENST00000562150 586 ntTSL 412.35□□□□□ -0.436e-11■■■■■ 39.3
MATR3P43243 OGFOD1-206ENST00000565682 567 ntTSL 412.34□□□□□ -0.436e-11■■■■■ 39.3
MATR3P43243 OGFOD1-201ENST00000336111 2415 ntTSL 210.46□□□□□ -0.746e-11■■■■■ 39.3
MATR3P43243 OGFOD1-202ENST00000561646 584 ntTSL 29□□□□□ -0.976e-11■■■■■ 39.3
MATR3P43243 OGFOD1-211ENST00000569802 474 ntTSL 44.88□□□□□ -1.636e-11■■■■■ 39.3
MATR3P43243 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.022e-6■■■■■ 39.1
MATR3P43243 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.182e-6■■■■■ 39.1
MATR3P43243 ZNF621-207ENST00000490457 916 ntTSL 316.61■□□□□ 0.257e-11■■■■■ 39
MATR3P43243 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.077e-11■■■■■ 39
MATR3P43243 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC14.73□□□□□ -0.057e-11■■■■■ 39
MATR3P43243 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC14.12□□□□□ -0.157e-11■■■■■ 39
MATR3P43243 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.37e-11■■■■■ 39
MATR3P43243 ZNF621-206ENST00000462161 536 ntTSL 310.97□□□□□ -0.657e-11■■■■■ 39
MATR3P43243 ZNF621-208ENST00000492098 1098 ntTSL 1 (best)9.98□□□□□ -0.817e-11■■■■■ 39
MATR3P43243 ZNF621-205ENST00000453351 565 ntTSL 49.35□□□□□ -0.917e-11■■■■■ 39
MATR3P43243 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.89■■□□□ 1.892e-11■■■■■ 38.9
MATR3P43243 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.66■■□□□ 1.72e-11■■■■■ 38.9
MATR3P43243 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.09■■□□□ 1.612e-11■■■■■ 38.9
MATR3P43243 TANGO2-215ENST00000450019 1689 ntTSL 524.74■■□□□ 1.552e-11■■■■■ 38.9
MATR3P43243 TANGO2-208ENST00000430807 733 ntTSL 324.51■■□□□ 1.512e-11■■■■■ 38.9
MATR3P43243 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.462e-11■■■■■ 38.9
MATR3P43243 TANGO2-206ENST00000411907 568 ntTSL 424.01■■□□□ 1.432e-11■■■■■ 38.9
MATR3P43243 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.82■■□□□ 1.42e-11■■■■■ 38.9
MATR3P43243 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.45■■□□□ 1.352e-11■■■■■ 38.9
MATR3P43243 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.03■■□□□ 1.282e-11■■■■■ 38.9
MATR3P43243 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.92■■□□□ 1.12e-11■■■■■ 38.9
MATR3P43243 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.82■■□□□ 1.082e-11■■■■■ 38.9
MATR3P43243 TANGO2-211ENST00000434168 862 ntTSL 320.33■□□□□ 0.852e-11■■■■■ 38.9
MATR3P43243 IKZF1-213ENST00000471793 1779 ntTSL 220.29■□□□□ 0.842e-11■■■■■ 38.9
MATR3P43243 TANGO2-216ENST00000450664 570 ntTSL 418.73■□□□□ 0.592e-11■■■■■ 38.9
MATR3P43243 TANGO2-226ENST00000490583 888 ntTSL 318.48■□□□□ 0.552e-11■■■■■ 38.9
MATR3P43243 TANGO2-203ENST00000399807 2241 ntTSL 518.42■□□□□ 0.542e-11■■■■■ 38.9
MATR3P43243 TANGO2-218ENST00000462579 649 ntTSL 417.65■□□□□ 0.422e-11■■■■■ 38.9
MATR3P43243 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.76■□□□□ 0.272e-11■■■■■ 38.9
MATR3P43243 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.36■□□□□ 0.212e-11■■■■■ 38.9
MATR3P43243 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.3■□□□□ 0.22e-11■■■■■ 38.9
MATR3P43243 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.16■□□□□ 0.182e-11■■■■■ 38.9
MATR3P43243 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC16.01■□□□□ 0.152e-11■■■■■ 38.9
MATR3P43243 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC15.86■□□□□ 0.132e-11■■■■■ 38.9
MATR3P43243 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.71■□□□□ 0.112e-11■■■■■ 38.9
MATR3P43243 TANGO2-213ENST00000444651 847 ntTSL 315.46■□□□□ 0.072e-11■■■■■ 38.9
MATR3P43243 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC15.32■□□□□ 0.042e-11■■■■■ 38.9
MATR3P43243 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.91□□□□□ -0.022e-11■■■■■ 38.9
MATR3P43243 TANGO2-224ENST00000485715 617 ntTSL 514.67□□□□□ -0.062e-11■■■■■ 38.9
MATR3P43243 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.212e-11■■■■■ 38.9
MATR3P43243 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC12.66□□□□□ -0.382e-11■■■■■ 38.9
MATR3P43243 TANGO2-225ENST00000490121 125 ntTSL 311.69□□□□□ -0.542e-11■■■■■ 38.9
MATR3P43243 IKZF1-208ENST00000426121 201 ntTSL 1 (best)5.92□□□□□ -1.462e-11■■■■■ 38.9
Retrieved 100 of 16,209 protein–RNA pairs in 67.5 ms