RNA–Protein interactions for RNA: ENST00000505581.5

SPOP-209, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 5

Gene SPOP, Length 984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-209ENST00000505581 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
SPOP-209ENST00000505581 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
SPOP-209ENST00000505581 ABCC9O60706 1549 aa31.9■■■□□ 2.7
SPOP-209ENST00000505581 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
SPOP-209ENST00000505581 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
SPOP-209ENST00000505581 NACADO15069 1562 aa30.53■■■□□ 2.48
SPOP-209ENST00000505581 ZCCHC6Q5VYS8 1495 aaKnown RBP30.34■■■□□ 2.45
SPOP-209ENST00000505581 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
SPOP-209ENST00000505581 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
SPOP-209ENST00000505581 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
SPOP-209ENST00000505581 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.36
SPOP-209ENST00000505581 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.33
SPOP-209ENST00000505581 SCRIBQ14160 1630 aa29.6■■■□□ 2.33
SPOP-209ENST00000505581 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
SPOP-209ENST00000505581 SHROOM4Q9ULL8 1493 aa29.35■■■□□ 2.29
SPOP-209ENST00000505581 EIF4G1Q04637 1599 aaKnown RBP28.89■■■□□ 2.22
SPOP-209ENST00000505581 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
SPOP-209ENST00000505581 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
SPOP-209ENST00000505581 SMARCA4P51532 1647 aa28.28■■■□□ 2.12
SPOP-209ENST00000505581 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
SPOP-209ENST00000505581 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
SPOP-209ENST00000505581 NCAPD3P42695 1498 aa28.19■■■□□ 2.1
SPOP-209ENST00000505581 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
SPOP-209ENST00000505581 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
SPOP-209ENST00000505581 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
SPOP-209ENST00000505581 PEG3Q9GZU2 1588 aa27.99■■■□□ 2.07
SPOP-209ENST00000505581 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
SPOP-209ENST00000505581 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
SPOP-209ENST00000505581 WIZO95785 1651 aa27.74■■■□□ 2.03
SPOP-209ENST00000505581 NESP48681 1621 aa27.55■■■□□ 2
SPOP-209ENST00000505581 ERCC6Q03468 1493 aa27.52■■■□□ 2
SPOP-209ENST00000505581 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
SPOP-209ENST00000505581 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
SPOP-209ENST00000505581 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
SPOP-209ENST00000505581 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
SPOP-209ENST00000505581 CUX2O14529 1486 aa27.23■■□□□ 1.95
SPOP-209ENST00000505581 CFTRP13569 1480 aa27.18■■□□□ 1.94
SPOP-209ENST00000505581 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
SPOP-209ENST00000505581 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.93
SPOP-209ENST00000505581 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
SPOP-209ENST00000505581 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
SPOP-209ENST00000505581 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
SPOP-209ENST00000505581 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
SPOP-209ENST00000505581 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
SPOP-209ENST00000505581 WDR62O43379 1518 aa26.91■■□□□ 1.9
SPOP-209ENST00000505581 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
SPOP-209ENST00000505581 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
SPOP-209ENST00000505581 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
SPOP-209ENST00000505581 ABCC8Q09428 1581 aa26.59■■□□□ 1.85
SPOP-209ENST00000505581 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
SPOP-209ENST00000505581 DNAJC5Q9H3Z4 198 aa26.54■■□□□ 1.84
SPOP-209ENST00000505581 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
SPOP-209ENST00000505581 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
SPOP-209ENST00000505581 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
SPOP-209ENST00000505581 CUX1P39880 1505 aa26.36■■□□□ 1.81
SPOP-209ENST00000505581 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
SPOP-209ENST00000505581 SOGA1O94964 1423 aa26.29■■□□□ 1.8
SPOP-209ENST00000505581 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
SPOP-209ENST00000505581 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
SPOP-209ENST00000505581 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
SPOP-209ENST00000505581 AQRO60306 1485 aaKnown RBP eCLIP26.22■■□□□ 1.791e-6■■■■■ 27.6
SPOP-209ENST00000505581 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
SPOP-209ENST00000505581 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
SPOP-209ENST00000505581 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
SPOP-209ENST00000505581 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
SPOP-209ENST00000505581 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
SPOP-209ENST00000505581 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
SPOP-209ENST00000505581 BIVM-ERCC5R4GMW8 1640 aa26.04■■□□□ 1.76
SPOP-209ENST00000505581 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
SPOP-209ENST00000505581 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
SPOP-209ENST00000505581 FBLN2P98095 1184 aa25.98■■□□□ 1.75
SPOP-209ENST00000505581 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
SPOP-209ENST00000505581 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
SPOP-209ENST00000505581 MAGI1Q96QZ7 1491 aaPredicted RBP25.92■■□□□ 1.74
SPOP-209ENST00000505581 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
SPOP-209ENST00000505581 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
SPOP-209ENST00000505581 CHD1O14646 1710 aa25.86■■□□□ 1.73
SPOP-209ENST00000505581 SYNJ2O15056 1496 aa25.83■■□□□ 1.73
SPOP-209ENST00000505581 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
SPOP-209ENST00000505581 ERICH3Q5RHP9 1530 aa25.71■■□□□ 1.71
SPOP-209ENST00000505581 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
SPOP-209ENST00000505581 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
SPOP-209ENST00000505581 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
SPOP-209ENST00000505581 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
SPOP-209ENST00000505581 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
SPOP-209ENST00000505581 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
SPOP-209ENST00000505581 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
SPOP-209ENST00000505581 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
SPOP-209ENST00000505581 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
SPOP-209ENST00000505581 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
SPOP-209ENST00000505581 IGF1RP08069 1367 aa25.55■■□□□ 1.68
SPOP-209ENST00000505581 NUP160Q12769 1436 aa25.54■■□□□ 1.68
SPOP-209ENST00000505581 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
SPOP-209ENST00000505581 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
SPOP-209ENST00000505581 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
SPOP-209ENST00000505581 CUL7Q14999 1698 aa25.42■■□□□ 1.66
SPOP-209ENST00000505581 CARMIL1Q5VZK9 1371 aa25.41■■□□□ 1.66
SPOP-209ENST00000505581 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
SPOP-209ENST00000505581 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
SPOP-209ENST00000505581 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms