RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
SPOP-202ENST00000393328 SHROOM4Q9ULL8 1493 aa20.21■□□□□ 0.83
SPOP-202ENST00000393328 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
SPOP-202ENST00000393328 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
SPOP-202ENST00000393328 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
SPOP-202ENST00000393328 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
SPOP-202ENST00000393328 ABCC9O60706 1549 aa19.13■□□□□ 0.65
SPOP-202ENST00000393328 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
SPOP-202ENST00000393328 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
SPOP-202ENST00000393328 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
SPOP-202ENST00000393328 HRCP23327 699 aa18.79■□□□□ 0.6
SPOP-202ENST00000393328 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
SPOP-202ENST00000393328 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
SPOP-202ENST00000393328 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
SPOP-202ENST00000393328 NACADO15069 1562 aa18.54■□□□□ 0.56
SPOP-202ENST00000393328 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
SPOP-202ENST00000393328 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
SPOP-202ENST00000393328 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
SPOP-202ENST00000393328 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
SPOP-202ENST00000393328 RB1CC1Q8TDY2 1594 aa18.36■□□□□ 0.53
SPOP-202ENST00000393328 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
SPOP-202ENST00000393328 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
SPOP-202ENST00000393328 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
SPOP-202ENST00000393328 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
SPOP-202ENST00000393328 WIZO95785 1651 aa18.19■□□□□ 0.5
SPOP-202ENST00000393328 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
SPOP-202ENST00000393328 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
SPOP-202ENST00000393328 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
SPOP-202ENST00000393328 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
SPOP-202ENST00000393328 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
SPOP-202ENST00000393328 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
SPOP-202ENST00000393328 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
SPOP-202ENST00000393328 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
SPOP-202ENST00000393328 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
SPOP-202ENST00000393328 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
SPOP-202ENST00000393328 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
SPOP-202ENST00000393328 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
SPOP-202ENST00000393328 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.41
SPOP-202ENST00000393328 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
SPOP-202ENST00000393328 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
SPOP-202ENST00000393328 SOGA1O94964 1423 aa17.55■□□□□ 0.4
SPOP-202ENST00000393328 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
SPOP-202ENST00000393328 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
SPOP-202ENST00000393328 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
SPOP-202ENST00000393328 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
SPOP-202ENST00000393328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
SPOP-202ENST00000393328 RANGAP1P46060 587 aaPredicted RBP17.45■□□□□ 0.38
SPOP-202ENST00000393328 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
SPOP-202ENST00000393328 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
SPOP-202ENST00000393328 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
SPOP-202ENST00000393328 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
SPOP-202ENST00000393328 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
SPOP-202ENST00000393328 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
SPOP-202ENST00000393328 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
SPOP-202ENST00000393328 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
SPOP-202ENST00000393328 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
SPOP-202ENST00000393328 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
SPOP-202ENST00000393328 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
SPOP-202ENST00000393328 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
SPOP-202ENST00000393328 EEA1Q15075 1411 aa17.14■□□□□ 0.33
SPOP-202ENST00000393328 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
SPOP-202ENST00000393328 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
SPOP-202ENST00000393328 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
SPOP-202ENST00000393328 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
SPOP-202ENST00000393328 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
SPOP-202ENST00000393328 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
SPOP-202ENST00000393328 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
SPOP-202ENST00000393328 CUX1P39880 1505 aa17.03■□□□□ 0.32
SPOP-202ENST00000393328 CFTRP13569 1480 aa17.02■□□□□ 0.32
SPOP-202ENST00000393328 TOP2BQ02880 1626 aa17.02■□□□□ 0.32
SPOP-202ENST00000393328 CLIP1P30622 1438 aa17.01■□□□□ 0.31
SPOP-202ENST00000393328 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
SPOP-202ENST00000393328 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
SPOP-202ENST00000393328 APLP2Q06481 763 aa16.94■□□□□ 0.3
SPOP-202ENST00000393328 NESP48681 1621 aa16.93■□□□□ 0.3
SPOP-202ENST00000393328 KIF21BO75037 1637 aa16.91■□□□□ 0.3
SPOP-202ENST00000393328 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
SPOP-202ENST00000393328 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
SPOP-202ENST00000393328 CUX2O14529 1486 aa16.88■□□□□ 0.29
SPOP-202ENST00000393328 MIER1Q8N108 512 aa16.84■□□□□ 0.29
SPOP-202ENST00000393328 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
SPOP-202ENST00000393328 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
SPOP-202ENST00000393328 PRXQ9BXM0 1461 aa16.82■□□□□ 0.28
SPOP-202ENST00000393328 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
SPOP-202ENST00000393328 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
SPOP-202ENST00000393328 MYT1Q01538 1121 aa16.81■□□□□ 0.28
SPOP-202ENST00000393328 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
SPOP-202ENST00000393328 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
SPOP-202ENST00000393328 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
SPOP-202ENST00000393328 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
SPOP-202ENST00000393328 IGF1RP08069 1367 aa16.78■□□□□ 0.28
SPOP-202ENST00000393328 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
SPOP-202ENST00000393328 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
SPOP-202ENST00000393328 ITGAEP38570 1179 aa16.71■□□□□ 0.27
SPOP-202ENST00000393328 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
SPOP-202ENST00000393328 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
SPOP-202ENST00000393328 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
SPOP-202ENST00000393328 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
SPOP-202ENST00000393328 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
SPOP-202ENST00000393328 ARHGAP35Q9NRY4 1499 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms