RNA–Protein interactions for RNA: ENST00000509079.5

SPOP-214, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 5

Gene SPOP, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-214ENST00000509079 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
SPOP-214ENST00000509079 ABCC9O60706 1549 aa33.99■■■■□ 3.03
SPOP-214ENST00000509079 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
SPOP-214ENST00000509079 RB1CC1Q8TDY2 1594 aa32.22■■■□□ 2.75
SPOP-214ENST00000509079 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
SPOP-214ENST00000509079 NACADO15069 1562 aa31.94■■■□□ 2.7
SPOP-214ENST00000509079 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
SPOP-214ENST00000509079 PABPN1Q86U42 306 aaKnown RBP eCLIP31.67■■■□□ 2.66
SPOP-214ENST00000509079 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
SPOP-214ENST00000509079 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
SPOP-214ENST00000509079 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
SPOP-214ENST00000509079 ZCCHC6Q5VYS8 1495 aaKnown RBP31.02■■■□□ 2.56
SPOP-214ENST00000509079 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
SPOP-214ENST00000509079 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
SPOP-214ENST00000509079 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
SPOP-214ENST00000509079 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.5
SPOP-214ENST00000509079 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
SPOP-214ENST00000509079 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
SPOP-214ENST00000509079 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
SPOP-214ENST00000509079 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
SPOP-214ENST00000509079 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
SPOP-214ENST00000509079 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
SPOP-214ENST00000509079 CUX2O14529 1486 aa29.35■■■□□ 2.29
SPOP-214ENST00000509079 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
SPOP-214ENST00000509079 SMARCA4P51532 1647 aa29.27■■■□□ 2.28
SPOP-214ENST00000509079 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
SPOP-214ENST00000509079 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
SPOP-214ENST00000509079 BAZ1BQ9UIG0 1483 aaKnown RBP29.13■■■□□ 2.25
SPOP-214ENST00000509079 NESP48681 1621 aa29.11■■■□□ 2.25
SPOP-214ENST00000509079 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
SPOP-214ENST00000509079 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
SPOP-214ENST00000509079 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
SPOP-214ENST00000509079 THOC2Q8NI27 1593 aaKnown RBP28.79■■■□□ 2.2
SPOP-214ENST00000509079 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
SPOP-214ENST00000509079 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
SPOP-214ENST00000509079 CADPSQ9ULU8 1353 aa28.63■■■□□ 2.17
SPOP-214ENST00000509079 WIZO95785 1651 aa28.51■■■□□ 2.15
SPOP-214ENST00000509079 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
SPOP-214ENST00000509079 WDR62O43379 1518 aa28.39■■■□□ 2.14
SPOP-214ENST00000509079 CEP164Q9UPV0 1460 aa28.36■■■□□ 2.13
SPOP-214ENST00000509079 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
SPOP-214ENST00000509079 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
SPOP-214ENST00000509079 RSF1Q96T23 1441 aaPredicted RBP28.25■■■□□ 2.11
SPOP-214ENST00000509079 CFTRP13569 1480 aa28.23■■■□□ 2.11
SPOP-214ENST00000509079 TOP2AP11388 1531 aaKnown RBP28.17■■■□□ 2.1
SPOP-214ENST00000509079 OSCARQ8IYS5 282 aa28.06■■■□□ 2.08
SPOP-214ENST00000509079 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
SPOP-214ENST00000509079 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
SPOP-214ENST00000509079 IFT140Q96RY7 1462 aa27.8■■■□□ 2.04
SPOP-214ENST00000509079 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
SPOP-214ENST00000509079 ZNF608Q9ULD9 1512 aaPredicted RBP27.76■■■□□ 2.03
SPOP-214ENST00000509079 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
SPOP-214ENST00000509079 ABCC8Q09428 1581 aa27.67■■■□□ 2.02
SPOP-214ENST00000509079 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
SPOP-214ENST00000509079 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
SPOP-214ENST00000509079 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
SPOP-214ENST00000509079 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
SPOP-214ENST00000509079 EIF4G3O43432 1585 aaKnown RBP27.56■■■□□ 2
SPOP-214ENST00000509079 ARHGEF11O15085 1522 aa27.53■■■□□ 2
SPOP-214ENST00000509079 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.991e-6■■■■■ 27.6
SPOP-214ENST00000509079 FBLN2P98095 1184 aa27.48■■□□□ 1.99
SPOP-214ENST00000509079 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
SPOP-214ENST00000509079 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
SPOP-214ENST00000509079 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
SPOP-214ENST00000509079 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
SPOP-214ENST00000509079 SOGA1O94964 1423 aa27.35■■□□□ 1.97
SPOP-214ENST00000509079 CHD1O14646 1710 aa27.34■■□□□ 1.97
SPOP-214ENST00000509079 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
SPOP-214ENST00000509079 TRHP20396 242 aaPredicted RBP27.25■■□□□ 1.95
SPOP-214ENST00000509079 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
SPOP-214ENST00000509079 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
SPOP-214ENST00000509079 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
SPOP-214ENST00000509079 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
SPOP-214ENST00000509079 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
SPOP-214ENST00000509079 CUX1P39880 1505 aa27.16■■□□□ 1.94
SPOP-214ENST00000509079 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
SPOP-214ENST00000509079 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
SPOP-214ENST00000509079 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
SPOP-214ENST00000509079 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
SPOP-214ENST00000509079 SYNJ2O15056 1496 aa27.04■■□□□ 1.92
SPOP-214ENST00000509079 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
SPOP-214ENST00000509079 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
SPOP-214ENST00000509079 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
SPOP-214ENST00000509079 PBRM1Q86U86 1689 aa26.89■■□□□ 1.9
SPOP-214ENST00000509079 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
SPOP-214ENST00000509079 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
SPOP-214ENST00000509079 GRIN2AQ12879 1464 aa26.75■■□□□ 1.87
SPOP-214ENST00000509079 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
SPOP-214ENST00000509079 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
SPOP-214ENST00000509079 NUP160Q12769 1436 aa26.65■■□□□ 1.86
SPOP-214ENST00000509079 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
SPOP-214ENST00000509079 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
SPOP-214ENST00000509079 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
SPOP-214ENST00000509079 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
SPOP-214ENST00000509079 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
SPOP-214ENST00000509079 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
SPOP-214ENST00000509079 SHROOM2Q13796 1616 aa26.49■■□□□ 1.83
SPOP-214ENST00000509079 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
SPOP-214ENST00000509079 JPH4Q96JJ6 628 aa26.45■■□□□ 1.82
SPOP-214ENST00000509079 NPM1P06748 294 aaKnown RBP eCLIP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms