RNA–Protein interactions for RNA: ENST00000347630.6

SPOP-201, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPOP, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-201ENST00000347630 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
SPOP-201ENST00000347630 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
SPOP-201ENST00000347630 DCAF8L2P0C7V8 631 aa31.48■■■□□ 2.63
SPOP-201ENST00000347630 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.6
SPOP-201ENST00000347630 ZCCHC6Q5VYS8 1495 aaKnown RBP30.97■■■□□ 2.55
SPOP-201ENST00000347630 ABCC9O60706 1549 aa30.56■■■□□ 2.48
SPOP-201ENST00000347630 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
SPOP-201ENST00000347630 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
SPOP-201ENST00000347630 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
SPOP-201ENST00000347630 NACADO15069 1562 aa29.52■■■□□ 2.32
SPOP-201ENST00000347630 MYO15BQ96JP2 1530 aa29.49■■■□□ 2.31
SPOP-201ENST00000347630 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
SPOP-201ENST00000347630 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.27
SPOP-201ENST00000347630 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
SPOP-201ENST00000347630 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
SPOP-201ENST00000347630 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
SPOP-201ENST00000347630 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
SPOP-201ENST00000347630 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
SPOP-201ENST00000347630 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
SPOP-201ENST00000347630 WIZO95785 1651 aa28.5■■■□□ 2.15
SPOP-201ENST00000347630 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
SPOP-201ENST00000347630 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
SPOP-201ENST00000347630 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
SPOP-201ENST00000347630 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
SPOP-201ENST00000347630 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
SPOP-201ENST00000347630 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
SPOP-201ENST00000347630 CCDC88BA6NC98 1476 aa27.94■■■□□ 2.06
SPOP-201ENST00000347630 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
SPOP-201ENST00000347630 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
SPOP-201ENST00000347630 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
SPOP-201ENST00000347630 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
SPOP-201ENST00000347630 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
SPOP-201ENST00000347630 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
SPOP-201ENST00000347630 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
SPOP-201ENST00000347630 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
SPOP-201ENST00000347630 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
SPOP-201ENST00000347630 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
SPOP-201ENST00000347630 SOGA1O94964 1423 aa27.23■■□□□ 1.95
SPOP-201ENST00000347630 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
SPOP-201ENST00000347630 HMGXB3Q12766 1538 aa27.22■■□□□ 1.95
SPOP-201ENST00000347630 RUSC2Q8N2Y8 1516 aa27.17■■□□□ 1.94
SPOP-201ENST00000347630 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
SPOP-201ENST00000347630 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
SPOP-201ENST00000347630 PPARGC1BQ86YN6 1023 aaKnown RBP26.99■■□□□ 1.91
SPOP-201ENST00000347630 CSRNP3Q8WYN3 585 aa26.98■■□□□ 1.91
SPOP-201ENST00000347630 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.91
SPOP-201ENST00000347630 CFTRP13569 1480 aa26.95■■□□□ 1.9
SPOP-201ENST00000347630 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
SPOP-201ENST00000347630 CADPSQ9ULU8 1353 aa26.93■■□□□ 1.9
SPOP-201ENST00000347630 NESP48681 1621 aa26.91■■□□□ 1.9
SPOP-201ENST00000347630 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
SPOP-201ENST00000347630 CUX1P39880 1505 aa26.78■■□□□ 1.88
SPOP-201ENST00000347630 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
SPOP-201ENST00000347630 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
SPOP-201ENST00000347630 EEA1Q15075 1411 aa26.62■■□□□ 1.85
SPOP-201ENST00000347630 CEP162Q5TB80 1403 aa26.57■■□□□ 1.84
SPOP-201ENST00000347630 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
SPOP-201ENST00000347630 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
SPOP-201ENST00000347630 GOLGA3Q08378 1498 aa26.52■■□□□ 1.84
SPOP-201ENST00000347630 TNIKQ9UKE5 1360 aa26.51■■□□□ 1.83
SPOP-201ENST00000347630 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
SPOP-201ENST00000347630 CUX2O14529 1486 aa26.48■■□□□ 1.83
SPOP-201ENST00000347630 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
SPOP-201ENST00000347630 RAD54L2Q9Y4B4 1467 aa26.47■■□□□ 1.83
SPOP-201ENST00000347630 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
SPOP-201ENST00000347630 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
SPOP-201ENST00000347630 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
SPOP-201ENST00000347630 TOPBP1Q92547 1522 aa26.35■■□□□ 1.81
SPOP-201ENST00000347630 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
SPOP-201ENST00000347630 URB2Q14146 1524 aaKnown RBP26.33■■□□□ 1.8
SPOP-201ENST00000347630 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
SPOP-201ENST00000347630 IGF1RP08069 1367 aa26.31■■□□□ 1.8
SPOP-201ENST00000347630 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
SPOP-201ENST00000347630 CLIP1P30622 1438 aa26.3■■□□□ 1.8
SPOP-201ENST00000347630 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
SPOP-201ENST00000347630 KIF21BO75037 1637 aa26.28■■□□□ 1.8
SPOP-201ENST00000347630 PRXQ9BXM0 1461 aa26.26■■□□□ 1.79
SPOP-201ENST00000347630 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
SPOP-201ENST00000347630 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
SPOP-201ENST00000347630 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.78
SPOP-201ENST00000347630 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
SPOP-201ENST00000347630 HRCP23327 699 aa26.09■■□□□ 1.77
SPOP-201ENST00000347630 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
SPOP-201ENST00000347630 ABCA10Q8WWZ4 1543 aa26.05■■□□□ 1.76
SPOP-201ENST00000347630 APLP2Q06481 763 aa26.04■■□□□ 1.76
SPOP-201ENST00000347630 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
SPOP-201ENST00000347630 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.751e-6■■■■□ 24.4
SPOP-201ENST00000347630 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
SPOP-201ENST00000347630 VPS8Q8N3P4 1428 aa25.96■■□□□ 1.75
SPOP-201ENST00000347630 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
SPOP-201ENST00000347630 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
SPOP-201ENST00000347630 GAPVD1Q14C86 1478 aa25.94■■□□□ 1.74
SPOP-201ENST00000347630 KANK4Q5T7N3 995 aaPredicted RBP25.89■■□□□ 1.73
SPOP-201ENST00000347630 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
SPOP-201ENST00000347630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
SPOP-201ENST00000347630 ARHGAP35Q9NRY4 1499 aa25.87■■□□□ 1.73
SPOP-201ENST00000347630 HNRNPUL2Q1KMD3 747 aaKnown RBP25.85■■□□□ 1.73
SPOP-201ENST00000347630 FBLN2P98095 1184 aa25.81■■□□□ 1.72
SPOP-201ENST00000347630 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
SPOP-201ENST00000347630 FHOD3Q2V2M9 1422 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms