RNA–Protein interactions for RNA: ENST00000509869.5

SPOP-216, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 5

Gene SPOP, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-216ENST00000509869 NISCHQ9Y2I1 1504 aa22.8■■□□□ 1.24
SPOP-216ENST00000509869 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
SPOP-216ENST00000509869 ABCC9O60706 1549 aa20.04■□□□□ 0.8
SPOP-216ENST00000509869 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
SPOP-216ENST00000509869 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
SPOP-216ENST00000509869 NACADO15069 1562 aa19.1■□□□□ 0.65
SPOP-216ENST00000509869 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
SPOP-216ENST00000509869 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
SPOP-216ENST00000509869 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
SPOP-216ENST00000509869 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
SPOP-216ENST00000509869 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
SPOP-216ENST00000509869 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
SPOP-216ENST00000509869 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
SPOP-216ENST00000509869 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
SPOP-216ENST00000509869 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
SPOP-216ENST00000509869 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
SPOP-216ENST00000509869 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
SPOP-216ENST00000509869 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
SPOP-216ENST00000509869 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
SPOP-216ENST00000509869 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
SPOP-216ENST00000509869 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
SPOP-216ENST00000509869 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
SPOP-216ENST00000509869 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
SPOP-216ENST00000509869 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
SPOP-216ENST00000509869 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
SPOP-216ENST00000509869 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
SPOP-216ENST00000509869 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
SPOP-216ENST00000509869 WIZO95785 1651 aa17.4■□□□□ 0.38
SPOP-216ENST00000509869 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
SPOP-216ENST00000509869 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
SPOP-216ENST00000509869 NESP48681 1621 aa17.3■□□□□ 0.36
SPOP-216ENST00000509869 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
SPOP-216ENST00000509869 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
SPOP-216ENST00000509869 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
SPOP-216ENST00000509869 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
SPOP-216ENST00000509869 CUX2O14529 1486 aa17.07■□□□□ 0.32
SPOP-216ENST00000509869 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
SPOP-216ENST00000509869 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
SPOP-216ENST00000509869 CFTRP13569 1480 aa17■□□□□ 0.31
SPOP-216ENST00000509869 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
SPOP-216ENST00000509869 SUPT5HO00267 1087 aaKnown RBP16.96■□□□□ 0.31
SPOP-216ENST00000509869 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
SPOP-216ENST00000509869 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
SPOP-216ENST00000509869 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
SPOP-216ENST00000509869 WDR62O43379 1518 aa16.85■□□□□ 0.29
SPOP-216ENST00000509869 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
SPOP-216ENST00000509869 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
SPOP-216ENST00000509869 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
SPOP-216ENST00000509869 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
SPOP-216ENST00000509869 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
SPOP-216ENST00000509869 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
SPOP-216ENST00000509869 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
SPOP-216ENST00000509869 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
SPOP-216ENST00000509869 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.23
SPOP-216ENST00000509869 CUX1P39880 1505 aa16.51■□□□□ 0.23
SPOP-216ENST00000509869 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
SPOP-216ENST00000509869 SOGA1O94964 1423 aa16.48■□□□□ 0.23
SPOP-216ENST00000509869 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
SPOP-216ENST00000509869 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
SPOP-216ENST00000509869 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPOP-216ENST00000509869 EIF4G3O43432 1585 aaKnown RBP16.44■□□□□ 0.22
SPOP-216ENST00000509869 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
SPOP-216ENST00000509869 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
SPOP-216ENST00000509869 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
SPOP-216ENST00000509869 FBLN2P98095 1184 aa16.36■□□□□ 0.21
SPOP-216ENST00000509869 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
SPOP-216ENST00000509869 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
SPOP-216ENST00000509869 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
SPOP-216ENST00000509869 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
SPOP-216ENST00000509869 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
SPOP-216ENST00000509869 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
SPOP-216ENST00000509869 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
SPOP-216ENST00000509869 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
SPOP-216ENST00000509869 CHD1O14646 1710 aa16.26■□□□□ 0.19
SPOP-216ENST00000509869 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
SPOP-216ENST00000509869 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
SPOP-216ENST00000509869 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
SPOP-216ENST00000509869 PBRM1Q86U86 1689 aa16.21■□□□□ 0.19
SPOP-216ENST00000509869 ABCA5Q8WWZ7 1642 aa16.21■□□□□ 0.19
SPOP-216ENST00000509869 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
SPOP-216ENST00000509869 RIMBP3CA6NJZ7 1639 aa16.12■□□□□ 0.17
SPOP-216ENST00000509869 RIMBP3BA6NNM3 1639 aa16.12■□□□□ 0.17
SPOP-216ENST00000509869 RIMBP3Q9UFD9 1639 aa16.12■□□□□ 0.17
SPOP-216ENST00000509869 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
SPOP-216ENST00000509869 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
SPOP-216ENST00000509869 ADAMTS12P58397 1594 aa16.08■□□□□ 0.16
SPOP-216ENST00000509869 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
SPOP-216ENST00000509869 GRIN2AQ12879 1464 aa16.06■□□□□ 0.16
SPOP-216ENST00000509869 CLASP1Q7Z460 1538 aa16.05■□□□□ 0.16
SPOP-216ENST00000509869 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
SPOP-216ENST00000509869 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
SPOP-216ENST00000509869 IGF1RP08069 1367 aa15.99■□□□□ 0.15
SPOP-216ENST00000509869 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
SPOP-216ENST00000509869 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
SPOP-216ENST00000509869 NUP160Q12769 1436 aa15.97■□□□□ 0.15
SPOP-216ENST00000509869 CUL7Q14999 1698 aa15.92■□□□□ 0.14
SPOP-216ENST00000509869 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
SPOP-216ENST00000509869 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
SPOP-216ENST00000509869 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
SPOP-216ENST00000509869 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms