RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 NISCHQ9Y2I1 1504 aa14.31□□□□□ -0.12
SPOP-208ENST00000504889 CCDC180Q9P1Z9 1646 aa12.76□□□□□ -0.37
SPOP-208ENST00000504889 ABCC9O60706 1549 aa12.6□□□□□ -0.39
SPOP-208ENST00000504889 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
SPOP-208ENST00000504889 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
SPOP-208ENST00000504889 NACADO15069 1562 aa12.01□□□□□ -0.49
SPOP-208ENST00000504889 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
SPOP-208ENST00000504889 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
SPOP-208ENST00000504889 DCAF1Q9Y4B6 1507 aa11.79□□□□□ -0.52
SPOP-208ENST00000504889 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPOP-208ENST00000504889 UNC13AQ9UPW8 1703 aa11.76□□□□□ -0.53
SPOP-208ENST00000504889 SCRIBQ14160 1630 aa11.71□□□□□ -0.54
SPOP-208ENST00000504889 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
SPOP-208ENST00000504889 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
SPOP-208ENST00000504889 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
SPOP-208ENST00000504889 EIF4G1Q04637 1599 aaKnown RBP11.38□□□□□ -0.59
SPOP-208ENST00000504889 CC2D2AQ9P2K1 1620 aa11.36□□□□□ -0.59
SPOP-208ENST00000504889 CECR2Q9BXF3 1484 aa11.31□□□□□ -0.6
SPOP-208ENST00000504889 SMARCA4P51532 1647 aa11.14□□□□□ -0.63
SPOP-208ENST00000504889 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
SPOP-208ENST00000504889 SMARCA2P51531 1590 aa11.08□□□□□ -0.64
SPOP-208ENST00000504889 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
SPOP-208ENST00000504889 NCAPD3P42695 1498 aa11.04□□□□□ -0.64
SPOP-208ENST00000504889 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
SPOP-208ENST00000504889 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
SPOP-208ENST00000504889 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
SPOP-208ENST00000504889 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
SPOP-208ENST00000504889 WIZO95785 1651 aa10.95□□□□□ -0.66
SPOP-208ENST00000504889 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
SPOP-208ENST00000504889 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
SPOP-208ENST00000504889 NESP48681 1621 aa10.85□□□□□ -0.67
SPOP-208ENST00000504889 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
SPOP-208ENST00000504889 TOP2AP11388 1531 aaKnown RBP10.81□□□□□ -0.68
SPOP-208ENST00000504889 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
SPOP-208ENST00000504889 CADPSQ9ULU8 1353 aa10.76□□□□□ -0.69
SPOP-208ENST00000504889 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
SPOP-208ENST00000504889 CUX2O14529 1486 aa10.73□□□□□ -0.69
SPOP-208ENST00000504889 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
SPOP-208ENST00000504889 THOC2Q8NI27 1593 aaKnown RBP10.68□□□□□ -0.7
SPOP-208ENST00000504889 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
SPOP-208ENST00000504889 CCDC88BA6NC98 1476 aa10.67□□□□□ -0.7
SPOP-208ENST00000504889 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
SPOP-208ENST00000504889 CFTRP13569 1480 aa10.66□□□□□ -0.7
SPOP-208ENST00000504889 MRC2Q9UBG0 1479 aa10.65□□□□□ -0.7
SPOP-208ENST00000504889 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
SPOP-208ENST00000504889 POTEDQ86YR6 584 aa10.6□□□□□ -0.71
SPOP-208ENST00000504889 WDR62O43379 1518 aa10.58□□□□□ -0.72
SPOP-208ENST00000504889 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
SPOP-208ENST00000504889 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
SPOP-208ENST00000504889 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
SPOP-208ENST00000504889 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.74
SPOP-208ENST00000504889 AEBP2Q6ZN18 517 aaPredicted RBP10.45□□□□□ -0.74
SPOP-208ENST00000504889 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
SPOP-208ENST00000504889 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
SPOP-208ENST00000504889 POLA1P09884 1462 aaPredicted RBP10.37□□□□□ -0.75
SPOP-208ENST00000504889 ZNF608Q9ULD9 1512 aaPredicted RBP10.37□□□□□ -0.75
SPOP-208ENST00000504889 FGD5Q6ZNL6 1462 aa10.36□□□□□ -0.75
SPOP-208ENST00000504889 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
SPOP-208ENST00000504889 SOGA1O94964 1423 aa10.35□□□□□ -0.75
SPOP-208ENST00000504889 CUX1P39880 1505 aa10.35□□□□□ -0.75
SPOP-208ENST00000504889 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
SPOP-208ENST00000504889 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
SPOP-208ENST00000504889 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
SPOP-208ENST00000504889 FBLN2P98095 1184 aa10.32□□□□□ -0.76
SPOP-208ENST00000504889 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
SPOP-208ENST00000504889 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
SPOP-208ENST00000504889 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
SPOP-208ENST00000504889 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
SPOP-208ENST00000504889 WDR97A6NE52 1622 aa10.26□□□□□ -0.77
SPOP-208ENST00000504889 TOP2BQ02880 1626 aa10.26□□□□□ -0.77
SPOP-208ENST00000504889 BIVM-ERCC5R4GMW8 1640 aa10.26□□□□□ -0.77
SPOP-208ENST00000504889 CHD1O14646 1710 aa10.24□□□□□ -0.77
SPOP-208ENST00000504889 SNAPC4Q5SXM2 1469 aa10.24□□□□□ -0.77
SPOP-208ENST00000504889 PBRM1Q86U86 1689 aa10.24□□□□□ -0.77
SPOP-208ENST00000504889 GRIN2BQ13224 1484 aa10.23□□□□□ -0.77
SPOP-208ENST00000504889 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
SPOP-208ENST00000504889 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
SPOP-208ENST00000504889 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
SPOP-208ENST00000504889 ABCA10Q8WWZ4 1543 aa10.22□□□□□ -0.77
SPOP-208ENST00000504889 MAGI1Q96QZ7 1491 aaPredicted RBP10.2□□□□□ -0.78
SPOP-208ENST00000504889 ABCA5Q8WWZ7 1642 aa10.19□□□□□ -0.78
SPOP-208ENST00000504889 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
SPOP-208ENST00000504889 RIMBP3CA6NJZ7 1639 aa10.14□□□□□ -0.79
SPOP-208ENST00000504889 RIMBP3BA6NNM3 1639 aa10.14□□□□□ -0.79
SPOP-208ENST00000504889 RIMBP3Q9UFD9 1639 aa10.14□□□□□ -0.79
SPOP-208ENST00000504889 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
SPOP-208ENST00000504889 ADAMTS12P58397 1594 aa10.12□□□□□ -0.79
SPOP-208ENST00000504889 ERICH3Q5RHP9 1530 aa10.12□□□□□ -0.79
SPOP-208ENST00000504889 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
SPOP-208ENST00000504889 KIF27Q86VH2 1401 aa10.1□□□□□ -0.79
SPOP-208ENST00000504889 GRIN2AQ12879 1464 aa10.1□□□□□ -0.79
SPOP-208ENST00000504889 CLASP1Q7Z460 1538 aa10.08□□□□□ -0.8
SPOP-208ENST00000504889 CYB5RLQ6IPT4 315 aa10.07□□□□□ -0.8
SPOP-208ENST00000504889 CUL7Q14999 1698 aa10.05□□□□□ -0.8
SPOP-208ENST00000504889 CEP170Q5SW79 1584 aa10.05□□□□□ -0.8
SPOP-208ENST00000504889 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
SPOP-208ENST00000504889 ARAP1Q96P48 1450 aa10.02□□□□□ -0.81
SPOP-208ENST00000504889 NUP160Q12769 1436 aa10.01□□□□□ -0.81
SPOP-208ENST00000504889 IGF1RP08069 1367 aa10.01□□□□□ -0.81
SPOP-208ENST00000504889 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms