RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.51
SUCLG1-201ENST00000393868 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
SUCLG1-201ENST00000393868 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
SUCLG1-201ENST00000393868 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
SUCLG1-201ENST00000393868 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
SUCLG1-201ENST00000393868 FOXD1Q16676 465 aa19.31■□□□□ 0.68
SUCLG1-201ENST00000393868 ADRA2BP18089 450 aa18.47■□□□□ 0.55
SUCLG1-201ENST00000393868 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
SUCLG1-201ENST00000393868 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
SUCLG1-201ENST00000393868 MSH5O43196 834 aa17.92■□□□□ 0.46
SUCLG1-201ENST00000393868 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
SUCLG1-201ENST00000393868 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
SUCLG1-201ENST00000393868 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
SUCLG1-201ENST00000393868 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
SUCLG1-201ENST00000393868 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
SUCLG1-201ENST00000393868 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
SUCLG1-201ENST00000393868 KCNA4P22459 653 aa16.48■□□□□ 0.23
SUCLG1-201ENST00000393868 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
SUCLG1-201ENST00000393868 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
SUCLG1-201ENST00000393868 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
SUCLG1-201ENST00000393868 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
SUCLG1-201ENST00000393868 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
SUCLG1-201ENST00000393868 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
SUCLG1-201ENST00000393868 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
SUCLG1-201ENST00000393868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.072e-8■■□□□ 14.3
SUCLG1-201ENST00000393868 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
SUCLG1-201ENST00000393868 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
SUCLG1-201ENST00000393868 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
SUCLG1-201ENST00000393868 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
SUCLG1-201ENST00000393868 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
SUCLG1-201ENST00000393868 ZBTB22O15209 634 aa15.14■□□□□ 0.01
SUCLG1-201ENST00000393868 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
SUCLG1-201ENST00000393868 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
SUCLG1-201ENST00000393868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
SUCLG1-201ENST00000393868 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
SUCLG1-201ENST00000393868 CACNB1Q02641 598 aaPredicted RBP15□□□□□ -0.01
SUCLG1-201ENST00000393868 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
SUCLG1-201ENST00000393868 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
SUCLG1-201ENST00000393868 APLP2Q06481 763 aa14.95□□□□□ -0.02
SUCLG1-201ENST00000393868 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
SUCLG1-201ENST00000393868 CAPN15O75808 1086 aa14.77□□□□□ -0.04
SUCLG1-201ENST00000393868 ATXN8OSP0DMR3 200 aa14.74□□□□□ -0.05
SUCLG1-201ENST00000393868 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
SUCLG1-201ENST00000393868 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
SUCLG1-201ENST00000393868 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
SUCLG1-201ENST00000393868 DSG3P32926 999 aa14.51□□□□□ -0.09
SUCLG1-201ENST00000393868 ABCB7O75027 752 aa14.46□□□□□ -0.09
SUCLG1-201ENST00000393868 POLA2Q14181 598 aa14.39□□□□□ -0.11
SUCLG1-201ENST00000393868 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
SUCLG1-201ENST00000393868 FBLN2P98095 1184 aa14.12□□□□□ -0.15
SUCLG1-201ENST00000393868 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
SUCLG1-201ENST00000393868 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
SUCLG1-201ENST00000393868 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
SUCLG1-201ENST00000393868 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
SUCLG1-201ENST00000393868 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
SUCLG1-201ENST00000393868 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
SUCLG1-201ENST00000393868 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
SUCLG1-201ENST00000393868 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
SUCLG1-201ENST00000393868 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
SUCLG1-201ENST00000393868 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
SUCLG1-201ENST00000393868 FKBP8Q14318 412 aa13.59□□□□□ -0.23
SUCLG1-201ENST00000393868 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.24
SUCLG1-201ENST00000393868 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
SUCLG1-201ENST00000393868 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
SUCLG1-201ENST00000393868 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
SUCLG1-201ENST00000393868 PROM2Q8N271 834 aa13.42□□□□□ -0.26
SUCLG1-201ENST00000393868 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
SUCLG1-201ENST00000393868 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
SUCLG1-201ENST00000393868 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
SUCLG1-201ENST00000393868 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
SUCLG1-201ENST00000393868 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
SUCLG1-201ENST00000393868 FBXO3Q9UK99 471 aa13.19□□□□□ -0.3
SUCLG1-201ENST00000393868 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
SUCLG1-201ENST00000393868 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
SUCLG1-201ENST00000393868 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
SUCLG1-201ENST00000393868 POTEHQ6S545 545 aa13.01□□□□□ -0.33
SUCLG1-201ENST00000393868 PLEKHG5O94827 1062 aa13□□□□□ -0.33
SUCLG1-201ENST00000393868 CREBZFQ9NS37 354 aa13□□□□□ -0.33
SUCLG1-201ENST00000393868 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
SUCLG1-201ENST00000393868 MIER1Q8N108 512 aa12.99□□□□□ -0.33
SUCLG1-201ENST00000393868 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
SUCLG1-201ENST00000393868 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
SUCLG1-201ENST00000393868 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
SUCLG1-201ENST00000393868 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
SUCLG1-201ENST00000393868 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
SUCLG1-201ENST00000393868 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
SUCLG1-201ENST00000393868 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
SUCLG1-201ENST00000393868 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
SUCLG1-201ENST00000393868 HAX1O00165 279 aa12.74□□□□□ -0.37
SUCLG1-201ENST00000393868 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
SUCLG1-201ENST00000393868 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
SUCLG1-201ENST00000393868 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
SUCLG1-201ENST00000393868 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
SUCLG1-201ENST00000393868 NUBP1P53384 320 aa12.65□□□□□ -0.38
SUCLG1-201ENST00000393868 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
SUCLG1-201ENST00000393868 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
SUCLG1-201ENST00000393868 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
SUCLG1-201ENST00000393868 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
SUCLG1-201ENST00000393868 EVX2Q03828 476 aa12.55□□□□□ -0.4
SUCLG1-201ENST00000393868 GSE1Q14687 1217 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms