RNA–Protein interactions for RNA: ENST00000503676.5

SPOP-205, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPOP, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-205ENST00000503676 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
SPOP-205ENST00000503676 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
SPOP-205ENST00000503676 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
SPOP-205ENST00000503676 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
SPOP-205ENST00000503676 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
SPOP-205ENST00000503676 ABCC9O60706 1549 aa23.01■■□□□ 1.27
SPOP-205ENST00000503676 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.23
SPOP-205ENST00000503676 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
SPOP-205ENST00000503676 NACADO15069 1562 aa22.41■■□□□ 1.18
SPOP-205ENST00000503676 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
SPOP-205ENST00000503676 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
SPOP-205ENST00000503676 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
SPOP-205ENST00000503676 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
SPOP-205ENST00000503676 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
SPOP-205ENST00000503676 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
SPOP-205ENST00000503676 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
SPOP-205ENST00000503676 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
SPOP-205ENST00000503676 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
SPOP-205ENST00000503676 BAZ1AQ9NRL2 1556 aaPredicted RBP21.39■■□□□ 1.01
SPOP-205ENST00000503676 WIZO95785 1651 aa21.36■■□□□ 1.01
SPOP-205ENST00000503676 SMARCA4P51532 1647 aa21.31■■□□□ 1
SPOP-205ENST00000503676 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
SPOP-205ENST00000503676 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
SPOP-205ENST00000503676 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
SPOP-205ENST00000503676 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
SPOP-205ENST00000503676 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
SPOP-205ENST00000503676 PEG3Q9GZU2 1588 aa20.92■□□□□ 0.94
SPOP-205ENST00000503676 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
SPOP-205ENST00000503676 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
SPOP-205ENST00000503676 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SPOP-205ENST00000503676 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
SPOP-205ENST00000503676 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
SPOP-205ENST00000503676 HMGXB3Q12766 1538 aa20.65■□□□□ 0.9
SPOP-205ENST00000503676 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
SPOP-205ENST00000503676 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
SPOP-205ENST00000503676 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
SPOP-205ENST00000503676 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
SPOP-205ENST00000503676 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
SPOP-205ENST00000503676 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
SPOP-205ENST00000503676 CFTRP13569 1480 aa20.31■□□□□ 0.84
SPOP-205ENST00000503676 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
SPOP-205ENST00000503676 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
SPOP-205ENST00000503676 NESP48681 1621 aa20.21■□□□□ 0.83
SPOP-205ENST00000503676 SOGA1O94964 1423 aa20.21■□□□□ 0.83
SPOP-205ENST00000503676 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
SPOP-205ENST00000503676 CUX1P39880 1505 aa20.1■□□□□ 0.81
SPOP-205ENST00000503676 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
SPOP-205ENST00000503676 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.81
SPOP-205ENST00000503676 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
SPOP-205ENST00000503676 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
SPOP-205ENST00000503676 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
SPOP-205ENST00000503676 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
SPOP-205ENST00000503676 EEA1Q15075 1411 aa19.97■□□□□ 0.79
SPOP-205ENST00000503676 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
SPOP-205ENST00000503676 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
SPOP-205ENST00000503676 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
SPOP-205ENST00000503676 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
SPOP-205ENST00000503676 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
SPOP-205ENST00000503676 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.77
SPOP-205ENST00000503676 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
SPOP-205ENST00000503676 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
SPOP-205ENST00000503676 CUX2O14529 1486 aa19.82■□□□□ 0.76
SPOP-205ENST00000503676 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
SPOP-205ENST00000503676 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
SPOP-205ENST00000503676 GOLGA3Q08378 1498 aa19.8■□□□□ 0.76
SPOP-205ENST00000503676 RANGAP1P46060 587 aaPredicted RBP19.78■□□□□ 0.76
SPOP-205ENST00000503676 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
SPOP-205ENST00000503676 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
SPOP-205ENST00000503676 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
SPOP-205ENST00000503676 KIF21BO75037 1637 aa19.71■□□□□ 0.75
SPOP-205ENST00000503676 CEP162Q5TB80 1403 aa19.7■□□□□ 0.74
SPOP-205ENST00000503676 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
SPOP-205ENST00000503676 IGF1RP08069 1367 aa19.67■□□□□ 0.74
SPOP-205ENST00000503676 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
SPOP-205ENST00000503676 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
SPOP-205ENST00000503676 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
SPOP-205ENST00000503676 TDRD9Q8NDG6 1382 aaKnown RBP19.64■□□□□ 0.73
SPOP-205ENST00000503676 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
SPOP-205ENST00000503676 CARMIL1Q5VZK9 1371 aa19.59■□□□□ 0.73
SPOP-205ENST00000503676 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
SPOP-205ENST00000503676 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
SPOP-205ENST00000503676 CLIP1P30622 1438 aa19.54■□□□□ 0.72
SPOP-205ENST00000503676 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
SPOP-205ENST00000503676 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
SPOP-205ENST00000503676 WDR97A6NE52 1622 aa19.5■□□□□ 0.71
SPOP-205ENST00000503676 WDR62O43379 1518 aa19.5■□□□□ 0.71
SPOP-205ENST00000503676 TARBP1Q13395 1621 aaKnown RBP19.49■□□□□ 0.71
SPOP-205ENST00000503676 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.711e-6■■■■□ 24.4
SPOP-205ENST00000503676 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
SPOP-205ENST00000503676 THOC2Q8NI27 1593 aaKnown RBP19.44■□□□□ 0.7
SPOP-205ENST00000503676 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
SPOP-205ENST00000503676 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
SPOP-205ENST00000503676 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
SPOP-205ENST00000503676 CUL7Q14999 1698 aa19.37■□□□□ 0.69
SPOP-205ENST00000503676 P3H3Q8IVL6 736 aa19.35■□□□□ 0.69
SPOP-205ENST00000503676 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
SPOP-205ENST00000503676 ARAP1Q96P48 1450 aa19.32■□□□□ 0.68
SPOP-205ENST00000503676 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
SPOP-205ENST00000503676 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
SPOP-205ENST00000503676 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms