RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
ERCC1-202ENST00000300853 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
ERCC1-202ENST00000300853 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
ERCC1-202ENST00000300853 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
ERCC1-202ENST00000300853 HRCP23327 699 aa19.42■□□□□ 0.7
ERCC1-202ENST00000300853 PELP1Q8IZL8 1130 aaKnown RBP19.32■□□□□ 0.68
ERCC1-202ENST00000300853 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
ERCC1-202ENST00000300853 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.65
ERCC1-202ENST00000300853 MYT1Q01538 1121 aa18.73■□□□□ 0.59
ERCC1-202ENST00000300853 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-202ENST00000300853 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
ERCC1-202ENST00000300853 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
ERCC1-202ENST00000300853 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
ERCC1-202ENST00000300853 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
ERCC1-202ENST00000300853 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
ERCC1-202ENST00000300853 FAM9AQ8IZU1 332 aaPredicted RBP18.4■□□□□ 0.54
ERCC1-202ENST00000300853 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
ERCC1-202ENST00000300853 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
ERCC1-202ENST00000300853 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
ERCC1-202ENST00000300853 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
ERCC1-202ENST00000300853 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
ERCC1-202ENST00000300853 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-202ENST00000300853 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
ERCC1-202ENST00000300853 ACIN1Q9UKV3 1341 aaKnown RBP18.11■□□□□ 0.49
ERCC1-202ENST00000300853 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
ERCC1-202ENST00000300853 DIEXFQ68CQ4 756 aaKnown RBP18.01■□□□□ 0.47
ERCC1-202ENST00000300853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-202ENST00000300853 NEUROD1Q13562 356 aa17.97■□□□□ 0.47
ERCC1-202ENST00000300853 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
ERCC1-202ENST00000300853 APLP2Q06481 763 aa17.56■□□□□ 0.4
ERCC1-202ENST00000300853 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-202ENST00000300853 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
ERCC1-202ENST00000300853 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
ERCC1-202ENST00000300853 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
ERCC1-202ENST00000300853 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
ERCC1-202ENST00000300853 NEFLP07196 543 aa17.4■□□□□ 0.38
ERCC1-202ENST00000300853 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-202ENST00000300853 BCANQ96GW7 911 aa17.32■□□□□ 0.36
ERCC1-202ENST00000300853 MIER1Q8N108 512 aa17.31■□□□□ 0.36
ERCC1-202ENST00000300853 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
ERCC1-202ENST00000300853 BCL11AQ9H165 835 aa17.17■□□□□ 0.34
ERCC1-202ENST00000300853 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
ERCC1-202ENST00000300853 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
ERCC1-202ENST00000300853 FKBP8Q14318 412 aa17■□□□□ 0.31
ERCC1-202ENST00000300853 ITGAEP38570 1179 aa16.99■□□□□ 0.31
ERCC1-202ENST00000300853 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
ERCC1-202ENST00000300853 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
ERCC1-202ENST00000300853 CDK11AQ9UQ88 783 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-202ENST00000300853 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
ERCC1-202ENST00000300853 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
ERCC1-202ENST00000300853 CEP162Q5TB80 1403 aa16.73■□□□□ 0.27
ERCC1-202ENST00000300853 ANP32CO43423 234 aa16.72■□□□□ 0.27
ERCC1-202ENST00000300853 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
ERCC1-202ENST00000300853 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-202ENST00000300853 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
ERCC1-202ENST00000300853 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
ERCC1-202ENST00000300853 SCRIBQ14160 1630 aa16.62■□□□□ 0.25
ERCC1-202ENST00000300853 NBR1Q14596 966 aa16.6■□□□□ 0.25
ERCC1-202ENST00000300853 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
ERCC1-202ENST00000300853 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
ERCC1-202ENST00000300853 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
ERCC1-202ENST00000300853 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
ERCC1-202ENST00000300853 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
ERCC1-202ENST00000300853 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
ERCC1-202ENST00000300853 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
ERCC1-202ENST00000300853 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-202ENST00000300853 ABCC9O60706 1549 aa16.48■□□□□ 0.23
ERCC1-202ENST00000300853 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
ERCC1-202ENST00000300853 CLIP1P30622 1438 aa16.46■□□□□ 0.23
ERCC1-202ENST00000300853 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
ERCC1-202ENST00000300853 DEKP35659 375 aaKnown RBP16.45■□□□□ 0.22
ERCC1-202ENST00000300853 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
ERCC1-202ENST00000300853 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
ERCC1-202ENST00000300853 DAXXQ9UER7 740 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-202ENST00000300853 GOLGA3Q08378 1498 aa16.39■□□□□ 0.22
ERCC1-202ENST00000300853 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
ERCC1-202ENST00000300853 SOGA1O94964 1423 aa16.38■□□□□ 0.21
ERCC1-202ENST00000300853 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
ERCC1-202ENST00000300853 EEA1Q15075 1411 aa16.34■□□□□ 0.21
ERCC1-202ENST00000300853 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
ERCC1-202ENST00000300853 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
ERCC1-202ENST00000300853 CECR2Q9BXF3 1484 aa16.3■□□□□ 0.2
ERCC1-202ENST00000300853 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
ERCC1-202ENST00000300853 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
ERCC1-202ENST00000300853 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
ERCC1-202ENST00000300853 PRKCSHP14314 528 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-202ENST00000300853 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
ERCC1-202ENST00000300853 TONSLQ96HA7 1378 aa16.25■□□□□ 0.19
ERCC1-202ENST00000300853 B4GALNT3Q6L9W6 998 aa16.24■□□□□ 0.19
ERCC1-202ENST00000300853 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
ERCC1-202ENST00000300853 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
ERCC1-202ENST00000300853 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
ERCC1-202ENST00000300853 DHX57Q6P158 1386 aaKnown RBP16.22■□□□□ 0.19
ERCC1-202ENST00000300853 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
ERCC1-202ENST00000300853 VPS8Q8N3P4 1428 aa16.19■□□□□ 0.18
ERCC1-202ENST00000300853 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
ERCC1-202ENST00000300853 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
ERCC1-202ENST00000300853 MROH2BQ7Z745 1585 aa16.17■□□□□ 0.18
ERCC1-202ENST00000300853 MRS2Q9HD23 443 aa16.16■□□□□ 0.18
ERCC1-202ENST00000300853 MSH5O43196 834 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms