RNA–Protein interactions for RNA: ENST00000487809.1

SUCLG1-206, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 2

Gene SUCLG1, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-206ENST00000487809 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
SUCLG1-206ENST00000487809 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
SUCLG1-206ENST00000487809 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
SUCLG1-206ENST00000487809 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
SUCLG1-206ENST00000487809 FOXD1Q16676 465 aa21.7■■□□□ 1.06
SUCLG1-206ENST00000487809 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
SUCLG1-206ENST00000487809 POTEDQ86YR6 584 aa20.72■□□□□ 0.91
SUCLG1-206ENST00000487809 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
SUCLG1-206ENST00000487809 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
SUCLG1-206ENST00000487809 MSH5O43196 834 aa20.31■□□□□ 0.84
SUCLG1-206ENST00000487809 ADRA2BP18089 450 aa20.29■□□□□ 0.84
SUCLG1-206ENST00000487809 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
SUCLG1-206ENST00000487809 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
SUCLG1-206ENST00000487809 DMRT2Q9Y5R5 561 aa18.51■□□□□ 0.55
SUCLG1-206ENST00000487809 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
SUCLG1-206ENST00000487809 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
SUCLG1-206ENST00000487809 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
SUCLG1-206ENST00000487809 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
SUCLG1-206ENST00000487809 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
SUCLG1-206ENST00000487809 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
SUCLG1-206ENST00000487809 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
SUCLG1-206ENST00000487809 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
SUCLG1-206ENST00000487809 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
SUCLG1-206ENST00000487809 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
SUCLG1-206ENST00000487809 KCNA4P22459 653 aa17.12■□□□□ 0.33
SUCLG1-206ENST00000487809 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
SUCLG1-206ENST00000487809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
SUCLG1-206ENST00000487809 U3KPZ7 1027 aaPredicted RBP16.68■□□□□ 0.26
SUCLG1-206ENST00000487809 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
SUCLG1-206ENST00000487809 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
SUCLG1-206ENST00000487809 CAPN15O75808 1086 aa16.37■□□□□ 0.21
SUCLG1-206ENST00000487809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
SUCLG1-206ENST00000487809 DSG3P32926 999 aa16.25■□□□□ 0.19
SUCLG1-206ENST00000487809 APLP2Q06481 763 aa16.25■□□□□ 0.19
SUCLG1-206ENST00000487809 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
SUCLG1-206ENST00000487809 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
SUCLG1-206ENST00000487809 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
SUCLG1-206ENST00000487809 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
SUCLG1-206ENST00000487809 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
SUCLG1-206ENST00000487809 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
SUCLG1-206ENST00000487809 POTEHQ6S545 545 aa16.04■□□□□ 0.16
SUCLG1-206ENST00000487809 ABCB7O75027 752 aa16■□□□□ 0.15
SUCLG1-206ENST00000487809 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SUCLG1-206ENST00000487809 ZBTB22O15209 634 aa15.74■□□□□ 0.11
SUCLG1-206ENST00000487809 POLA2Q14181 598 aa15.69■□□□□ 0.1
SUCLG1-206ENST00000487809 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
SUCLG1-206ENST00000487809 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
SUCLG1-206ENST00000487809 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
SUCLG1-206ENST00000487809 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
SUCLG1-206ENST00000487809 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
SUCLG1-206ENST00000487809 NISCHQ9Y2I1 1504 aa15.2■□□□□ 0.02
SUCLG1-206ENST00000487809 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
SUCLG1-206ENST00000487809 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
SUCLG1-206ENST00000487809 FBLN2P98095 1184 aa15.08■□□□□ 0
SUCLG1-206ENST00000487809 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
SUCLG1-206ENST00000487809 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
SUCLG1-206ENST00000487809 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
SUCLG1-206ENST00000487809 MKRN4PQ13434 485 aaPredicted RBP14.96□□□□□ -0.01
SUCLG1-206ENST00000487809 SPDYE2BA6NHP3 402 aa14.95□□□□□ -0.02
SUCLG1-206ENST00000487809 SPDYE6P0CI01 402 aa14.95□□□□□ -0.02
SUCLG1-206ENST00000487809 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
SUCLG1-206ENST00000487809 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
SUCLG1-206ENST00000487809 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
SUCLG1-206ENST00000487809 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
SUCLG1-206ENST00000487809 SSUH2Q9Y2M2 353 aa14.76□□□□□ -0.05
SUCLG1-206ENST00000487809 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
SUCLG1-206ENST00000487809 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
SUCLG1-206ENST00000487809 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
SUCLG1-206ENST00000487809 SP7Q8TDD2 431 aaPredicted RBP14.59□□□□□ -0.07
SUCLG1-206ENST00000487809 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
SUCLG1-206ENST00000487809 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
SUCLG1-206ENST00000487809 HAX1O00165 279 aa14.48□□□□□ -0.09
SUCLG1-206ENST00000487809 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
SUCLG1-206ENST00000487809 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
SUCLG1-206ENST00000487809 SPDYE4A6NLX3 237 aa14.31□□□□□ -0.12
SUCLG1-206ENST00000487809 EVX2Q03828 476 aa14.28□□□□□ -0.12
SUCLG1-206ENST00000487809 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
SUCLG1-206ENST00000487809 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
SUCLG1-206ENST00000487809 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
SUCLG1-206ENST00000487809 CREBZFQ9NS37 354 aa14.06□□□□□ -0.16
SUCLG1-206ENST00000487809 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
SUCLG1-206ENST00000487809 PROM2Q8N271 834 aa13.99□□□□□ -0.17
SUCLG1-206ENST00000487809 GABBR2O75899 941 aa13.98□□□□□ -0.17
SUCLG1-206ENST00000487809 ABCC9O60706 1549 aa13.91□□□□□ -0.18
SUCLG1-206ENST00000487809 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
SUCLG1-206ENST00000487809 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
SUCLG1-206ENST00000487809 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
SUCLG1-206ENST00000487809 CLCN6P51797 869 aa13.83□□□□□ -0.2
SUCLG1-206ENST00000487809 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
SUCLG1-206ENST00000487809 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
SUCLG1-206ENST00000487809 FKBP8Q14318 412 aa13.7□□□□□ -0.22
SUCLG1-206ENST00000487809 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
SUCLG1-206ENST00000487809 LHX8Q68G74 356 aa13.68□□□□□ -0.22
SUCLG1-206ENST00000487809 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
SUCLG1-206ENST00000487809 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
SUCLG1-206ENST00000487809 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
SUCLG1-206ENST00000487809 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
SUCLG1-206ENST00000487809 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
SUCLG1-206ENST00000487809 MIER1Q8N108 512 aa13.62□□□□□ -0.23
SUCLG1-206ENST00000487809 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms