Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AC127496.7-201ENST00000625110 1798 ntBASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 AC139795.1-202ENST00000500444 432 ntBASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 DUX4L18-201ENST00000553347 1267 ntBASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 AC120024.1-201ENST00000562672 995 ntBASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 HSD17B1P1-201ENST00000590052 955 ntBASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHA13Q9Y5I0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 ESRRAP2-201ENST00000418437 1549 ntBASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 AF131216.4-201ENST00000638924 1588 ntBASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHA13Q9Y5I0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHA13Q9Y5I0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA13Q9Y5I0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 AC242852.2-201ENST00000615738 1807 ntBASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHA13Q9Y5I0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA13Q9Y5I0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA13Q9Y5I0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA13Q9Y5I0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms