Protein–RNA interactions for Protein: Q9HC29

NOD2, Nucleotide-binding oligomerization domain-containing protein 2, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD2Q9HC29 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.21■■□□□ 1.31
NOD2Q9HC29 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NOD2Q9HC29 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NOD2Q9HC29 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NOD2Q9HC29 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NOD2Q9HC29 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.2■■□□□ 1.3
NOD2Q9HC29 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NOD2Q9HC29 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.2■■□□□ 1.3
NOD2Q9HC29 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.2■■□□□ 1.3
NOD2Q9HC29 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NOD2Q9HC29 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NOD2Q9HC29 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NOD2Q9HC29 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
NOD2Q9HC29 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NOD2Q9HC29 LINC00565-201ENST00000562710 2331 ntBASIC23.19■■□□□ 1.3
NOD2Q9HC29 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NOD2Q9HC29 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.19■■□□□ 1.3
NOD2Q9HC29 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NOD2Q9HC29 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.19■■□□□ 1.3
NOD2Q9HC29 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NOD2Q9HC29 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NOD2Q9HC29 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
NOD2Q9HC29 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.18■■□□□ 1.3
NOD2Q9HC29 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.18■■□□□ 1.3
NOD2Q9HC29 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.18■■□□□ 1.3
NOD2Q9HC29 MTDHP2-201ENST00000601468 714 ntBASIC23.18■■□□□ 1.3
NOD2Q9HC29 AC010997.5-201ENST00000609182 354 ntBASIC23.18■■□□□ 1.3
NOD2Q9HC29 MIR6722-201ENST00000617286 78 ntBASIC23.18■■□□□ 1.3
NOD2Q9HC29 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.18■■□□□ 1.3
NOD2Q9HC29 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NOD2Q9HC29 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NOD2Q9HC29 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
NOD2Q9HC29 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NOD2Q9HC29 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
NOD2Q9HC29 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NOD2Q9HC29 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NOD2Q9HC29 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NOD2Q9HC29 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NOD2Q9HC29 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NOD2Q9HC29 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NOD2Q9HC29 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NOD2Q9HC29 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NOD2Q9HC29 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NOD2Q9HC29 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NOD2Q9HC29 ABCB10P4-201ENST00000566803 2184 ntBASIC23.15■■□□□ 1.3
NOD2Q9HC29 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.15■■□□□ 1.3
NOD2Q9HC29 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.15■■□□□ 1.3
NOD2Q9HC29 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.15■■□□□ 1.3
NOD2Q9HC29 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NOD2Q9HC29 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NOD2Q9HC29 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NOD2Q9HC29 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.14■■□□□ 1.29
NOD2Q9HC29 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
NOD2Q9HC29 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.14■■□□□ 1.29
NOD2Q9HC29 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.14■■□□□ 1.29
NOD2Q9HC29 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NOD2Q9HC29 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NOD2Q9HC29 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NOD2Q9HC29 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.14■■□□□ 1.29
NOD2Q9HC29 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NOD2Q9HC29 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NOD2Q9HC29 ALDH1A3-203ENST00000557963 1670 ntBASIC23.13■■□□□ 1.29
NOD2Q9HC29 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NOD2Q9HC29 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NOD2Q9HC29 KRT16P3-201ENST00000439127 1283 ntBASIC23.13■■□□□ 1.29
NOD2Q9HC29 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NOD2Q9HC29 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NOD2Q9HC29 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NOD2Q9HC29 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.12■■□□□ 1.29
NOD2Q9HC29 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.12■■□□□ 1.29
NOD2Q9HC29 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NOD2Q9HC29 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NOD2Q9HC29 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.12■■□□□ 1.29
NOD2Q9HC29 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms