Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 AL022069.1-201ENST00000568025 1636 ntBASIC18.51■□□□□ 0.55
R3HDM4Q96D70 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.51■□□□□ 0.55
R3HDM4Q96D70 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 AC008406.3-201ENST00000620001 1374 ntBASIC18.5■□□□□ 0.55
R3HDM4Q96D70 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3HDM4Q96D70 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
R3HDM4Q96D70 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 KRT18P24-201ENST00000344739 1156 ntBASIC18.48■□□□□ 0.55
R3HDM4Q96D70 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 AC092068.2-201ENST00000590491 1708 ntBASIC18.48■□□□□ 0.55
R3HDM4Q96D70 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HDM4Q96D70 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3HDM4Q96D70 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 AC011551.1-201ENST00000614101 683 ntBASIC18.46■□□□□ 0.55
R3HDM4Q96D70 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HDM4Q96D70 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 KRT16P3-201ENST00000439127 1283 ntBASIC18.45■□□□□ 0.54
R3HDM4Q96D70 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
R3HDM4Q96D70 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 TSPY9P-201ENST00000440215 945 ntBASIC18.44■□□□□ 0.54
R3HDM4Q96D70 TSPY11P-201ENST00000442607 1045 ntBASIC18.44■□□□□ 0.54
R3HDM4Q96D70 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 DUSP8P3-201ENST00000399571 1760 ntBASIC18.44■□□□□ 0.54
R3HDM4Q96D70 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
R3HDM4Q96D70 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms