Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC71LQ8N9Z2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 AC242852.2-201ENST00000615738 1807 ntBASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC71LQ8N9Z2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC71LQ8N9Z2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 MIR639-201ENST00000384974 98 ntBASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 ALDH1A3-203ENST00000557963 1670 ntBASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC71LQ8N9Z2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71LQ8N9Z2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC71LQ8N9Z2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 AC018755.3-202ENST00000596210 929 ntBASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 AC133552.2-201ENST00000619106 1032 ntBASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71LQ8N9Z2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms