Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAP47Q5SQN1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAP47Q5SQN1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC008764.7-201ENST00000593779 1081 ntBASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC009086.3-201ENST00000623486 1008 ntBASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC241377.3-202ENST00000626088 1088 ntBASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC241585.3-202ENST00000628937 1088 ntBASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 AC245100.8-202ENST00000629247 1058 ntBASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNAP47Q5SQN1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.77■■□□□ 1.07
SNAP47Q5SQN1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNAP47Q5SQN1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 MIR939-201ENST00000401314 82 ntBASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNAP47Q5SQN1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNAP47Q5SQN1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAP47Q5SQN1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 AC142381.3-201ENST00000568208 1670 ntBASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 AC011298.3-201ENST00000615796 283 ntBASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.73■■□□□ 1.07
SNAP47Q5SQN1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 AC091305.1-201ENST00000479476 895 ntBASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 AL138724.1-201ENST00000606771 1088 ntBASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNAP47Q5SQN1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 RARRES2P6-201ENST00000567333 442 ntBASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 CA15P2-201ENST00000611168 834 ntBASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNAP47Q5SQN1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.7■■□□□ 1.07
SNAP47Q5SQN1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms