Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 IES6YEL044W 501 nt5.27□□□□□ -1.57
RPN11P43588 RPL28YGL103W 450 nt5.27□□□□□ -1.57
RPN11P43588 YHR032C-AYHR032C-A 120 nt5.27□□□□□ -1.57
RPN11P43588 NTR2YKR022C 969 nt5.27□□□□□ -1.57
RPN11P43588 PSR1YLL010C 1284 nt5.27□□□□□ -1.57
RPN11P43588 FLD1YLR404W 858 nt5.27□□□□□ -1.57
RPN11P43588 LAP2YNL045W 2016 nt5.27□□□□□ -1.57
RPN11P43588 YOL050CYOL050C 321 nt5.27□□□□□ -1.57
RPN11P43588 YBR053CYBR053C 1077 nt5.27□□□□□ -1.57
RPN11P43588 RSC58YLR033W 1509 nt5.27□□□□□ -1.57
RPN11P43588 SPC105YGL093W 2754 nt5.27□□□□□ -1.57
RPN11P43588 UBX2YML013W 1755 nt5.27□□□□□ -1.57
RPN11P43588 MHF2YDL160C-A 243 nt5.26□□□□□ -1.57
RPN11P43588 LSM6YDR378C 261 nt5.26□□□□□ -1.57
RPN11P43588 YEL028WYEL028W 462 nt5.26□□□□□ -1.57
RPN11P43588 EFB1YAL003W 621 nt5.26□□□□□ -1.57
RPN11P43588 CSR1YLR380W 1227 nt5.26□□□□□ -1.57
RPN11P43588 MAC1YMR021C 1254 nt5.26□□□□□ -1.57
RPN11P43588 PEX32YBR168W 1242 nt5.26□□□□□ -1.57
RPN11P43588 YEL020CYEL020C 1683 nt5.26□□□□□ -1.57
RPN11P43588 MRE11YMR224C 2079 nt5.26□□□□□ -1.57
RPN11P43588 LDB19YOR322C 2457 nt5.26□□□□□ -1.57
RPN11P43588 BZZ1YHR114W 1902 nt5.26□□□□□ -1.57
RPN11P43588 RAD28YDR030C 1521 nt5.26□□□□□ -1.57
RPN11P43588 BIT2YBR270C 1638 nt5.26□□□□□ -1.57
RPN11P43588 YEL067CYEL067C 588 nt5.25□□□□□ -1.57
RPN11P43588 YOR289WYOR289W 756 nt5.25□□□□□ -1.57
RPN11P43588 YTA12YMR089C 2478 nt5.25□□□□□ -1.57
RPN11P43588 VPS36YLR417W 1701 nt5.25□□□□□ -1.57
RPN11P43588 PAF1YBR279W 1338 nt5.24□□□□□ -1.57
RPN11P43588 ADP1YCR011C 3150 nt5.24□□□□□ -1.57
RPN11P43588 SNM1YDR478W 597 nt5.24□□□□□ -1.57
RPN11P43588 LSB1YGR136W 726 nt5.24□□□□□ -1.57
RPN11P43588 YHR173CYHR173C 339 nt5.24□□□□□ -1.57
RPN11P43588 YKL223WYKL223W 333 nt5.24□□□□□ -1.57
RPN11P43588 HMX1YLR205C 954 nt5.24□□□□□ -1.57
RPN11P43588 SEC17YBL050W 879 nt5.24□□□□□ -1.57
RPN11P43588 YPR174CYPR174C 666 nt5.24□□□□□ -1.57
RPN11P43588 ELP2YGR200C 2367 nt5.24□□□□□ -1.57
RPN11P43588 TAF5YBR198C 2397 nt5.24□□□□□ -1.57
RPN11P43588 LCB2YDR062W 1686 nt5.24□□□□□ -1.57
RPN11P43588 RBA50YDR527W 1320 nt5.23□□□□□ -1.57
RPN11P43588 INO2YDR123C 915 nt5.23□□□□□ -1.57
RPN11P43588 GTT1YIR038C 705 nt5.23□□□□□ -1.57
RPN11P43588 AAD10YJR155W 867 nt5.23□□□□□ -1.57
RPN11P43588 ADD37YMR184W 597 nt5.23□□□□□ -1.57
RPN11P43588 RAD14YMR201C 1116 nt5.23□□□□□ -1.57
RPN11P43588 MGS1YNL218W 1764 nt5.23□□□□□ -1.57
RPN11P43588 RIM101YHL027W 1878 nt5.23□□□□□ -1.57
RPN11P43588 CWH43YCR017C 2862 nt5.22□□□□□ -1.57
RPN11P43588 PDR12YPL058C 4536 nt5.22□□□□□ -1.57
RPN11P43588 IML2YJL082W 2196 nt5.22□□□□□ -1.57
RPN11P43588 KIN4YOR233W 2403 nt5.22□□□□□ -1.57
RPN11P43588 HSP30YCR021C 999 nt5.22□□□□□ -1.57
RPN11P43588 SPO74YGL170C 1242 nt5.22□□□□□ -1.57
RPN11P43588 RPL22AYLR061W 366 nt5.22□□□□□ -1.57
RPN11P43588 RAD17YOR368W 1206 nt5.22□□□□□ -1.57
RPN11P43588 GUP2YPL189W 1830 nt5.21□□□□□ -1.58
RPN11P43588 YDL121CYDL121C 450 nt5.21□□□□□ -1.58
RPN11P43588 EOS1YNL080C 1101 nt5.21□□□□□ -1.58
RPN11P43588 CCZ1YBR131W 2115 nt5.21□□□□□ -1.58
RPN11P43588 DBP9YLR276C 1785 nt5.2□□□□□ -1.58
RPN11P43588 MED2YDL005C 1296 nt5.2□□□□□ -1.58
RPN11P43588 SUR2YDR297W 1050 nt5.2□□□□□ -1.58
RPN11P43588 YDR396WYDR396W 501 nt5.2□□□□□ -1.58
RPN11P43588 TFB3YDR460W 966 nt5.2□□□□□ -1.58
RPN11P43588 PER33YLR064W 822 nt5.2□□□□□ -1.58
RPN11P43588 NUP1YOR098C 3231 nt5.19□□□□□ -1.58
RPN11P43588 AAP1YHR047C 2571 nt5.19□□□□□ -1.58
RPN11P43588 SLD2YKL108W 1362 nt5.19□□□□□ -1.58
RPN11P43588 MAD3YJL013C 1548 nt5.19□□□□□ -1.58
RPN11P43588 PHM8YER037W 966 nt5.19□□□□□ -1.58
RPN11P43588 HIS6YIL020C 786 nt5.19□□□□□ -1.58
RPN11P43588 YLR407WYLR407W 687 nt5.19□□□□□ -1.58
RPN11P43588 IMP1YMR150C 573 nt5.19□□□□□ -1.58
RPN11P43588 UGA1YGR019W 1416 nt5.19□□□□□ -1.58
RPN11P43588 ZPR1YGR211W 1461 nt5.19□□□□□ -1.58
RPN11P43588 HOS1YPR068C 1413 nt5.18□□□□□ -1.58
RPN11P43588 PTC1YDL006W 846 nt5.18□□□□□ -1.58
RPN11P43588 YDR250CYDR250C 276 nt5.18□□□□□ -1.58
RPN11P43588 ASP1YDR321W 1146 nt5.18□□□□□ -1.58
RPN11P43588 HES1YOR237W 1305 nt5.18□□□□□ -1.58
RPN11P43588 FDC1YDR539W 1512 nt5.18□□□□□ -1.58
RPN11P43588 SWC3YAL011W 1878 nt5.17□□□□□ -1.58
RPN11P43588 PXA1YPL147W 2613 nt5.17□□□□□ -1.58
RPN11P43588 FHL1YPR104C 2811 nt5.17□□□□□ -1.58
RPN11P43588 APA2YDR530C 978 nt5.17□□□□□ -1.58
RPN11P43588 MPC1YGL080W 393 nt5.17□□□□□ -1.58
RPN11P43588 LSM12YHR121W 564 nt5.17□□□□□ -1.58
RPN11P43588 ARP1YHR129C 1155 nt5.17□□□□□ -1.58
RPN11P43588 YML116W-AYML116W-A 303 nt5.17□□□□□ -1.58
RPN11P43588 TOM40YMR203W 1164 nt5.17□□□□□ -1.58
RPN11P43588 YOL024WYOL024W 519 nt5.17□□□□□ -1.58
RPN11P43588 YOR292CYOR292C 930 nt5.17□□□□□ -1.58
RPN11P43588 MIF2YKL089W 1650 nt5.17□□□□□ -1.58
RPN11P43588 DXO1YDR370C 1329 nt5.17□□□□□ -1.58
RPN11P43588 MCM6YGL201C 3054 nt5.17□□□□□ -1.58
RPN11P43588 SEC2YNL272C 2280 nt5.16□□□□□ -1.58
RPN11P43588 AKL1YBR059C 3327 nt5.16□□□□□ -1.58
RPN11P43588 RMD5YDR255C 1266 nt5.16□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms