Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 AAD6YFL056C 639 nt5.99□□□□□ -1.45
SSM4P40318 MRP51YPL118W 1035 nt5.99□□□□□ -1.45
SSM4P40318 POP4YBR257W 840 nt5.99□□□□□ -1.45
SSM4P40318 SPC105YGL093W 2754 nt5.98□□□□□ -1.45
SSM4P40318 NSI1YDR026C 1713 nt5.98□□□□□ -1.45
SSM4P40318 LOS1YKL205W 3303 nt5.98□□□□□ -1.45
SSM4P40318 LAS1YKR063C 1509 nt5.98□□□□□ -1.45
SSM4P40318 DSE3YOR264W 1293 nt5.98□□□□□ -1.45
SSM4P40318 LCB2YDR062W 1686 nt5.97□□□□□ -1.45
SSM4P40318 CDC48YDL126C 2508 nt5.97□□□□□ -1.45
SSM4P40318 NUP42YDR192C 1293 nt5.97□□□□□ -1.45
SSM4P40318 RPL12AYEL054C 498 nt5.97□□□□□ -1.45
SSM4P40318 NPY1YGL067W 1155 nt5.97□□□□□ -1.45
SSM4P40318 YHR212W-AYHR212W-A 204 nt5.97□□□□□ -1.45
SSM4P40318 YAR061WYAR061W 204 nt5.97□□□□□ -1.45
SSM4P40318 MRPL3YMR024W 1173 nt5.97□□□□□ -1.45
SSM4P40318 YCL021W-AYCL021W-A 378 nt5.97□□□□□ -1.45
SSM4P40318 ASK10YGR097W 3441 nt5.96□□□□□ -1.46
SSM4P40318 IMG2YCR071C 441 nt5.96□□□□□ -1.46
SSM4P40318 YDR246W-AYDR246W-A 201 nt5.96□□□□□ -1.46
SSM4P40318 MIC26YGR235C 702 nt5.96□□□□□ -1.46
SSM4P40318 RPS4BYHR203C 786 nt5.96□□□□□ -1.46
SSM4P40318 RPS4AYJR145C 786 nt5.96□□□□□ -1.46
SSM4P40318 MAC1YMR021C 1254 nt5.96□□□□□ -1.46
SSM4P40318 NAT5YOR253W 531 nt5.96□□□□□ -1.46
SSM4P40318 GWT1YJL091C 1473 nt5.96□□□□□ -1.46
SSM4P40318 LAP2YNL045W 2016 nt5.95□□□□□ -1.46
SSM4P40318 MAL13YGR288W 1422 nt5.95□□□□□ -1.46
SSM4P40318 PTC1YDL006W 846 nt5.95□□□□□ -1.46
SSM4P40318 YDR396WYDR396W 501 nt5.95□□□□□ -1.46
SSM4P40318 YEL028WYEL028W 462 nt5.95□□□□□ -1.46
SSM4P40318 YGL185CYGL185C 1140 nt5.95□□□□□ -1.46
SSM4P40318 RPS19AYOL121C 435 nt5.95□□□□□ -1.46
SSM4P40318 FOB1YDR110W 1701 nt5.95□□□□□ -1.46
SSM4P40318 KRE29YER038C 1395 nt5.94□□□□□ -1.46
SSM4P40318 SPC97YHR172W 2472 nt5.94□□□□□ -1.46
SSM4P40318 OLE1YGL055W 1533 nt5.94□□□□□ -1.46
SSM4P40318 YIL171WYIL171W 330 nt5.94□□□□□ -1.46
SSM4P40318 MNN11YJL183W 1269 nt5.94□□□□□ -1.46
SSM4P40318 YPL014WYPL014W 1146 nt5.94□□□□□ -1.46
SSM4P40318 CLD1YGR110W 1338 nt5.94□□□□□ -1.46
SSM4P40318 RKM4YDR257C 1485 nt5.93□□□□□ -1.46
SSM4P40318 ATG32YIL146C 1590 nt5.93□□□□□ -1.46
SSM4P40318 MMS2YGL087C 414 nt5.93□□□□□ -1.46
SSM4P40318 MID2YLR332W 1131 nt5.93□□□□□ -1.46
SSM4P40318 NOP2YNL061W 1857 nt5.92□□□□□ -1.46
SSM4P40318 GIP2YER054C 1647 nt5.92□□□□□ -1.46
SSM4P40318 MRE11YMR224C 2079 nt5.92□□□□□ -1.46
SSM4P40318 FMP48YGR052W 1110 nt5.92□□□□□ -1.46
SSM4P40318 SPC34YKR037C 888 nt5.92□□□□□ -1.46
SSM4P40318 CPR6YLR216C 1116 nt5.92□□□□□ -1.46
SSM4P40318 ECM33YBR078W 1290 nt5.92□□□□□ -1.46
SSM4P40318 PBN1YCL052C 1251 nt5.92□□□□□ -1.46
SSM4P40318 ARG4YHR018C 1392 nt5.92□□□□□ -1.46
SSM4P40318 LYS2YBR115C 4179 nt5.92□□□□□ -1.46
SSM4P40318 VAM7YGL212W 951 nt5.91□□□□□ -1.46
SSM4P40318 YJR038CYJR038C 363 nt5.91□□□□□ -1.46
SSM4P40318 ASC1YMR116C 960 nt5.91□□□□□ -1.46
SSM4P40318 TOM40YMR203W 1164 nt5.91□□□□□ -1.46
SSM4P40318 MCM2YBL023C 2607 nt5.9□□□□□ -1.46
SSM4P40318 YGL199CYGL199C 471 nt5.9□□□□□ -1.47
SSM4P40318 SKI8YGL213C 1194 nt5.9□□□□□ -1.47
SSM4P40318 NOP13YNL175C 1212 nt5.9□□□□□ -1.47
SSM4P40318 SPO77YLR341W 1434 nt5.9□□□□□ -1.47
SSM4P40318 KCC4YCL024W 3114 nt5.9□□□□□ -1.47
SSM4P40318 EIS1YMR031C 2532 nt5.89□□□□□ -1.47
SSM4P40318 FHL1YPR104C 2811 nt5.89□□□□□ -1.47
SSM4P40318 MRP4YHL004W 1185 nt5.89□□□□□ -1.47
SSM4P40318 APE1YKL103C 1545 nt5.89□□□□□ -1.47
SSM4P40318 TKL1YPR074C 2043 nt5.89□□□□□ -1.47
SSM4P40318 CCZ1YBR131W 2115 nt5.89□□□□□ -1.47
SSM4P40318 ISR1YPR106W 1332 nt5.88□□□□□ -1.47
SSM4P40318 SNM1YDR478W 597 nt5.88□□□□□ -1.47
SSM4P40318 RPL24AYGL031C 468 nt5.88□□□□□ -1.47
SSM4P40318 SKI6YGR195W 741 nt5.88□□□□□ -1.47
SSM4P40318 PHO86YJL117W 936 nt5.88□□□□□ -1.47
SSM4P40318 YMR030W-AYMR030W-A 291 nt5.88□□□□□ -1.47
SSM4P40318 SLX1YBR228W 915 nt5.88□□□□□ -1.47
SSM4P40318 ERG7YHR072W 2196 nt5.87□□□□□ -1.47
SSM4P40318 EMP47YFL048C 1338 nt5.87□□□□□ -1.47
SSM4P40318 snR7-LsnR7-L 214 nt5.87□□□□□ -1.47
SSM4P40318 YKR075CYKR075C 924 nt5.87□□□□□ -1.47
SSM4P40318 YOR292CYOR292C 930 nt5.87□□□□□ -1.47
SSM4P40318 RCM1YNL022C 1473 nt5.86□□□□□ -1.47
SSM4P40318 ARO80YDR421W 2853 nt5.86□□□□□ -1.47
SSM4P40318 BUD16YEL029C 939 nt5.86□□□□□ -1.47
SSM4P40318 IGO2YHR132W-A 396 nt5.86□□□□□ -1.47
SSM4P40318 YPR059CYPR059C 387 nt5.86□□□□□ -1.47
SSM4P40318 FAR8YMR029C 1572 nt5.86□□□□□ -1.47
SSM4P40318 SEC2YNL272C 2280 nt5.86□□□□□ -1.47
SSM4P40318 BUD8YLR353W 1812 nt5.86□□□□□ -1.47
SSM4P40318 SUB2YDL084W 1341 nt5.85□□□□□ -1.47
SSM4P40318 FUR1YHR128W 651 nt5.85□□□□□ -1.47
SSM4P40318 YKL107WYKL107W 930 nt5.85□□□□□ -1.47
SSM4P40318 GTR1YML121W 933 nt5.85□□□□□ -1.47
SSM4P40318 YDC1YPL087W 954 nt5.85□□□□□ -1.47
SSM4P40318 YPL113CYPL113C 1191 nt5.85□□□□□ -1.47
SSM4P40318 GUP2YPL189W 1830 nt5.85□□□□□ -1.47
SSM4P40318 SVF1YDR346C 1446 nt5.85□□□□□ -1.47
SSM4P40318 PRT1YOR361C 2292 nt5.85□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms