RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeastyeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM4YDR257C DRS1P32892 752 aaKnown RBP16.12■□□□□ 0.17
RKM4YDR257C MTC1P47018 478 aaKnown RBP15.78■□□□□ 0.12
RKM4YDR257C BFR2Q06631 534 aaKnown RBP14.07□□□□□ -0.16
RKM4YDR257C DIP2Q12220 943 aaPredicted RBP13.63□□□□□ -0.23
RKM4YDR257C AVT3P36062 692 aa13.5□□□□□ -0.25
RKM4YDR257C TFA1P36100 482 aa13.42□□□□□ -0.26
RKM4YDR257C ISW2Q08773 1120 aa12.81□□□□□ -0.36
RKM4YDR257C RSE1Q04693 1361 aaKnown RBP12.81□□□□□ -0.36
RKM4YDR257C FAP1P53971 965 aa12.65□□□□□ -0.38
RKM4YDR257C RPG1P38249 964 aaKnown RBP12.59□□□□□ -0.39
RKM4YDR257C PRI1P10363 409 aa12.52□□□□□ -0.41
RKM4YDR257C RPL17AP05740 184 aaKnown RBP12.3□□□□□ -0.44
RKM4YDR257C RPL17BP46990 184 aaKnown RBP12.3□□□□□ -0.44
RKM4YDR257C AAD16Q02895 342 aa12.27□□□□□ -0.44
RKM4YDR257C REB1P21538 810 aa12.14□□□□□ -0.47
RKM4YDR257C TSR3Q12094 313 aaKnown RBP11.89□□□□□ -0.51
RKM4YDR257C SPT21P35209 758 aa11.84□□□□□ -0.51
RKM4YDR257C PRY3P47033 881 aa11.82□□□□□ -0.52
RKM4YDR257C RIM101P33400 625 aa11.75□□□□□ -0.53
RKM4YDR257C RQC2Q12532 1038 aaKnown RBP11.74□□□□□ -0.53
RKM4YDR257C PTP3P40048 928 aa11.52□□□□□ -0.56
RKM4YDR257C MRPL32P25348 183 aa11.47□□□□□ -0.57
RKM4YDR257C YKR023WP36119 530 aaKnown RBP11.39□□□□□ -0.59
RKM4YDR257C OXP1P28273 1286 aa11.38□□□□□ -0.59
RKM4YDR257C SSP1P38871 571 aa11.37□□□□□ -0.59
RKM4YDR257C YIL055CP40523 627 aaKnown RBP11.28□□□□□ -0.6
RKM4YDR257C YAH1Q12184 172 aaKnown RBP11.26□□□□□ -0.61
RKM4YDR257C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
RKM4YDR257C HAA1Q12753 694 aaKnown RBP11.19□□□□□ -0.62
RKM4YDR257C TFC8Q12308 588 aa11.19□□□□□ -0.62
RKM4YDR257C HOP09932 586 aa11.17□□□□□ -0.62
RKM4YDR257C DMA1P38823 416 aa11.13□□□□□ -0.63
RKM4YDR257C YCK3P39962 524 aa11.12□□□□□ -0.63
RKM4YDR257C YLR271WQ06152 274 aa11.12□□□□□ -0.63
RKM4YDR257C CDC27P38042 758 aa11.08□□□□□ -0.64
RKM4YDR257C RSM7P47150 247 aa11.07□□□□□ -0.64
RKM4YDR257C DCD1P06773 312 aa11.06□□□□□ -0.64
RKM4YDR257C MGA2P40578 1113 aa10.94□□□□□ -0.66
RKM4YDR257C AI2P03876 854 aa10.86□□□□□ -0.67
RKM4YDR257C BCH2P36122 765 aa10.86□□□□□ -0.67
RKM4YDR257C BBC1P47068 1157 aa10.81□□□□□ -0.68
RKM4YDR257C PSD2P53037 1138 aaKnown RBP10.81□□□□□ -0.68
RKM4YDR257C CST9Q06032 482 aa10.79□□□□□ -0.68
RKM4YDR257C EPS1P40557 701 aa10.71□□□□□ -0.69
RKM4YDR257C UBP10P53874 792 aaPredicted RBP10.65□□□□□ -0.7
RKM4YDR257C SCY1P53009 804 aa10.64□□□□□ -0.71
RKM4YDR257C BDF1P35817 686 aa10.61□□□□□ -0.71
RKM4YDR257C YGL015CP33199 130 aa10.61□□□□□ -0.71
RKM4YDR257C MAP2P38174 421 aaKnown RBP10.6□□□□□ -0.71
RKM4YDR257C MRM1P25270 412 aa10.54□□□□□ -0.72
RKM4YDR257C SAS10Q12136 610 aaPredicted RBP10.47□□□□□ -0.73
RKM4YDR257C SLX5P32828 619 aaKnown RBP10.45□□□□□ -0.74
RKM4YDR257C RAM2P29703 316 aa10.43□□□□□ -0.74
RKM4YDR257C RTG3P38165 486 aa10.43□□□□□ -0.74
RKM4YDR257C RCR1P38212 213 aa10.38□□□□□ -0.75
RKM4YDR257C SET1P38827 1080 aaKnown RBP10.3□□□□□ -0.76
RKM4YDR257C MAK11P20484 414 aaKnown RBP10.29□□□□□ -0.76
RKM4YDR257C LEO1P38439 464 aa10.26□□□□□ -0.77
RKM4YDR257C VPS29P38759 282 aa10.26□□□□□ -0.77
RKM4YDR257C LEU3P08638 886 aa10.24□□□□□ -0.77
RKM4YDR257C TIF4632P39936 914 aaKnown RBP10.23□□□□□ -0.77
RKM4YDR257C IFH1P39520 1085 aa10.22□□□□□ -0.77
RKM4YDR257C YMR1P47147 688 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
RKM4YDR257C YPR148CQ06523 435 aa10.18□□□□□ -0.78
RKM4YDR257C CKB1P43639 278 aa10.15□□□□□ -0.78
RKM4YDR257C VPS70P47161 811 aa10.14□□□□□ -0.79
RKM4YDR257C COQ8P27697 501 aa10.13□□□□□ -0.79
RKM4YDR257C TGL3P40308 642 aa10.12□□□□□ -0.79
RKM4YDR257C DBP1P24784 617 aaKnown RBP10.1□□□□□ -0.79
RKM4YDR257C NSR1P27476 414 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
RKM4YDR257C STS1P38637 319 aa10.1□□□□□ -0.79
RKM4YDR257C YOR238WQ08634 303 aa10.1□□□□□ -0.79
RKM4YDR257C NOP53Q12080 455 aaKnown RBP10.09□□□□□ -0.79
RKM4YDR257C YFR006WP43590 535 aa10.07□□□□□ -0.8
RKM4YDR257C MIF2P35201 549 aa10.06□□□□□ -0.8
RKM4YDR257C YAP5P40574 245 aa10.06□□□□□ -0.8
RKM4YDR257C SPB4P25808 606 aaPredicted RBP10.05□□□□□ -0.8
RKM4YDR257C EDS1P38073 919 aa10□□□□□ -0.81
RKM4YDR257C TAF7Q05021 590 aa9.99□□□□□ -0.81
RKM4YDR257C PIB1Q06651 286 aa9.96□□□□□ -0.82
RKM4YDR257C RPN1P38764 993 aaKnown RBP9.95□□□□□ -0.82
RKM4YDR257C PTC3P34221 468 aaKnown RBP9.93□□□□□ -0.82
RKM4YDR257C PBS2P08018 668 aa9.92□□□□□ -0.82
RKM4YDR257C DSF2P38213 736 aa9.91□□□□□ -0.82
RKM4YDR257C VMA1P17255 1071 aaKnown RBP9.9□□□□□ -0.83
RKM4YDR257C REF2P42073 533 aaPredicted RBP9.88□□□□□ -0.83
RKM4YDR257C MST1P07236 462 aa9.85□□□□□ -0.83
RKM4YDR257C ATH1P48016 1211 aa9.81□□□□□ -0.84
RKM4YDR257C GRE2Q12068 342 aaKnown RBP9.81□□□□□ -0.84
RKM4YDR257C GTT3P39996 337 aa9.8□□□□□ -0.84
RKM4YDR257C SAM3Q08986 587 aa9.8□□□□□ -0.84
RKM4YDR257C MAM3Q12296 706 aa9.8□□□□□ -0.84
RKM4YDR257C MAK21Q12176 1025 aaKnown RBP9.79□□□□□ -0.84
RKM4YDR257C GUT1P32190 709 aa9.78□□□□□ -0.84
RKM4YDR257C YNR021WP53723 404 aaKnown RBP9.74□□□□□ -0.85
RKM4YDR257C GYP5Q12344 894 aa9.74□□□□□ -0.85
RKM4YDR257C IES2P40154 320 aa9.73□□□□□ -0.85
RKM4YDR257C COX6P00427 148 aa9.72□□□□□ -0.85
RKM4YDR257C VHR2P40041 505 aa9.69□□□□□ -0.86
RKM4YDR257C ABP1P15891 592 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms