RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeastyeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI8YGL213C DRS1P32892 752 aaKnown RBP14.38□□□□□ -0.11
SKI8YGL213C MTC1P47018 478 aaKnown RBP13.67□□□□□ -0.22
SKI8YGL213C BFR2Q06631 534 aaKnown RBP12.71□□□□□ -0.37
SKI8YGL213C TFA1P36100 482 aa12.31□□□□□ -0.44
SKI8YGL213C DIP2Q12220 943 aaPredicted RBP12.03□□□□□ -0.48
SKI8YGL213C AVT3P36062 692 aa11.98□□□□□ -0.49
SKI8YGL213C FAP1P53971 965 aa11.85□□□□□ -0.51
SKI8YGL213C PRI1P10363 409 aa11.27□□□□□ -0.61
SKI8YGL213C RSE1Q04693 1361 aaKnown RBP11.2□□□□□ -0.62
SKI8YGL213C AAD16Q02895 342 aa11.16□□□□□ -0.62
SKI8YGL213C RQC2Q12532 1038 aaKnown RBP11.16□□□□□ -0.62
SKI8YGL213C PRY3P47033 881 aa11.15□□□□□ -0.62
SKI8YGL213C ISW2Q08773 1120 aa11.1□□□□□ -0.63
SKI8YGL213C RPG1P38249 964 aaKnown RBP11□□□□□ -0.65
SKI8YGL213C RPL17AP05740 184 aaKnown RBP10.74□□□□□ -0.69
SKI8YGL213C RPL17BP46990 184 aaKnown RBP10.74□□□□□ -0.69
SKI8YGL213C YCK3P39962 524 aa10.64□□□□□ -0.71
SKI8YGL213C TSR3Q12094 313 aaKnown RBP10.64□□□□□ -0.71
SKI8YGL213C REB1P21538 810 aa10.58□□□□□ -0.72
SKI8YGL213C HAA1Q12753 694 aaKnown RBP10.5□□□□□ -0.73
SKI8YGL213C PTP3P40048 928 aa10.42□□□□□ -0.74
SKI8YGL213C DMA1P38823 416 aa10.41□□□□□ -0.74
SKI8YGL213C RIM101P33400 625 aa10.33□□□□□ -0.76
SKI8YGL213C SPT21P35209 758 aa10.32□□□□□ -0.76
SKI8YGL213C MRPL32P25348 183 aa10.21□□□□□ -0.77
SKI8YGL213C SSP1P38871 571 aa10.17□□□□□ -0.78
SKI8YGL213C YAH1Q12184 172 aaKnown RBP10.03□□□□□ -0.8
SKI8YGL213C OXP1P28273 1286 aa10.02□□□□□ -0.81
SKI8YGL213C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.99□□□□□ -0.81not detected
SKI8YGL213C YIL055CP40523 627 aaKnown RBP9.97□□□□□ -0.81
SKI8YGL213C YKR023WP36119 530 aaKnown RBP9.87□□□□□ -0.83
SKI8YGL213C YLR271WQ06152 274 aa9.87□□□□□ -0.83
SKI8YGL213C TAF7Q05021 590 aa9.86□□□□□ -0.83
SKI8YGL213C CDC27P38042 758 aa9.78□□□□□ -0.84
SKI8YGL213C YGL015CP33199 130 aa9.76□□□□□ -0.85
SKI8YGL213C RSM7P47150 247 aa9.76□□□□□ -0.85
SKI8YGL213C LEO1P38439 464 aa9.75□□□□□ -0.85
SKI8YGL213C MGA2P40578 1113 aa9.75□□□□□ -0.85
SKI8YGL213C HOP09932 586 aa9.71□□□□□ -0.86
SKI8YGL213C TFC8Q12308 588 aa9.68□□□□□ -0.86
SKI8YGL213C DCD1P06773 312 aa9.62□□□□□ -0.87
SKI8YGL213C CST9Q06032 482 aa9.6□□□□□ -0.87
SKI8YGL213C SAS10Q12136 610 aaPredicted RBP9.6□□□□□ -0.87
SKI8YGL213C AI2P03876 854 aa9.55□□□□□ -0.88
SKI8YGL213C PSD2P53037 1138 aaKnown RBP9.53□□□□□ -0.88
SKI8YGL213C LEU3P08638 886 aa9.52□□□□□ -0.89
SKI8YGL213C BBC1P47068 1157 aa9.48□□□□□ -0.89
SKI8YGL213C UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.9
SKI8YGL213C BCH2P36122 765 aa9.43□□□□□ -0.9
SKI8YGL213C MAP2P38174 421 aaKnown RBP9.43□□□□□ -0.9
SKI8YGL213C EPS1P40557 701 aa9.33□□□□□ -0.92
SKI8YGL213C RAM2P29703 316 aa9.32□□□□□ -0.92
SKI8YGL213C MRM1P25270 412 aa9.3□□□□□ -0.92
SKI8YGL213C SET1P38827 1080 aaKnown RBP9.29□□□□□ -0.92
SKI8YGL213C SCY1P53009 804 aa9.27□□□□□ -0.93
SKI8YGL213C RPN1P38764 993 aaKnown RBP9.25□□□□□ -0.93
SKI8YGL213C SPB4P25808 606 aaPredicted RBP9.24□□□□□ -0.93
SKI8YGL213C BDF1P35817 686 aa9.24□□□□□ -0.93
SKI8YGL213C RCR1P38212 213 aa9.22□□□□□ -0.93
SKI8YGL213C VPS70P47161 811 aa9.22□□□□□ -0.93
SKI8YGL213C RTG3P38165 486 aa9.21□□□□□ -0.94
SKI8YGL213C CKB1P43639 278 aa9.21□□□□□ -0.94
SKI8YGL213C IFH1P39520 1085 aa9.19□□□□□ -0.94
SKI8YGL213C YPR148CQ06523 435 aa9.16□□□□□ -0.94
SKI8YGL213C SLX5P32828 619 aaKnown RBP9.14□□□□□ -0.95
SKI8YGL213C MAK11P20484 414 aaKnown RBP9.13□□□□□ -0.95
SKI8YGL213C DMA2P53924 522 aa9.1□□□□□ -0.95
SKI8YGL213C TIF4632P39936 914 aaKnown RBP9.03□□□□□ -0.96
SKI8YGL213C TGL3P40308 642 aa9.03□□□□□ -0.96
SKI8YGL213C VPS29P38759 282 aa9.02□□□□□ -0.97
SKI8YGL213C COQ8P27697 501 aa9.01□□□□□ -0.97
SKI8YGL213C PBS2P08018 668 aa9□□□□□ -0.97
SKI8YGL213C DSF2P38213 736 aa8.99□□□□□ -0.97
SKI8YGL213C MIF2P35201 549 aa8.95□□□□□ -0.98
SKI8YGL213C YMR1P47147 688 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
SKI8YGL213C NOP53Q12080 455 aaKnown RBP8.93□□□□□ -0.98
SKI8YGL213C YNR021WP53723 404 aaKnown RBP8.9□□□□□ -0.98
SKI8YGL213C MAM3Q12296 706 aa8.9□□□□□ -0.98
SKI8YGL213C REF2P42073 533 aaPredicted RBP8.89□□□□□ -0.99
SKI8YGL213C BUD31P25337 157 aaPredicted RBP8.88□□□□□ -0.99
SKI8YGL213C STS1P38637 319 aa8.88□□□□□ -0.99
SKI8YGL213C KIN1P13185 1064 aa8.87□□□□□ -0.99
SKI8YGL213C DBP1P24784 617 aaKnown RBP8.87□□□□□ -0.99
SKI8YGL213C YFR006WP43590 535 aa8.87□□□□□ -0.99
SKI8YGL213C EDS1P38073 919 aa8.86□□□□□ -0.99
SKI8YGL213C IES2P40154 320 aa8.84□□□□□ -0.99
SKI8YGL213C RLF2Q12495 606 aa8.84□□□□□ -0.99
SKI8YGL213C GLC3P32775 704 aa8.83□□□□□ -1
SKI8YGL213C YOR238WQ08634 303 aa8.82□□□□□ -1
SKI8YGL213C HGH1P48362 394 aaKnown RBP8.79□□□□□ -1
SKI8YGL213C AIM7Q12156 149 aa8.79□□□□□ -1
SKI8YGL213C PTC3P34221 468 aaKnown RBP8.78□□□□□ -1
SKI8YGL213C MAK21Q12176 1025 aaKnown RBP8.78□□□□□ -1
SKI8YGL213C DIT2P21595 489 aa8.77□□□□□ -1.01
SKI8YGL213C NUP42P49686 430 aaKnown RBP8.75□□□□□ -1.01
SKI8YGL213C COX6P00427 148 aa8.74□□□□□ -1.01
SKI8YGL213C ABP1P15891 592 aaKnown RBP8.73□□□□□ -1.01
SKI8YGL213C ATF2P53296 535 aa8.73□□□□□ -1.01
SKI8YGL213C NSR1P27476 414 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
SKI8YGL213C PIB1Q06651 286 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms