RNA–Protein interactions for RNA: YKL103C

APE1, Transcript of Vacuolar aminopeptidase yscI, yeastyeast

Gene APE1, Length 1,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE1YKL103C MTC1P47018 478 aaKnown RBP11.58□□□□□ -0.56
APE1YKL103C DRS1P32892 752 aaKnown RBP11.22□□□□□ -0.61
APE1YKL103C FAP1P53971 965 aa10.52□□□□□ -0.73
APE1YKL103C TFA1P36100 482 aa10.41□□□□□ -0.74
APE1YKL103C BFR2Q06631 534 aaKnown RBP10.23□□□□□ -0.77
APE1YKL103C RQC2Q12532 1038 aaKnown RBP10.09□□□□□ -0.79
APE1YKL103C PRY3P47033 881 aa9.87□□□□□ -0.83
APE1YKL103C PRI1P10363 409 aa9.82□□□□□ -0.84
APE1YKL103C AAD16Q02895 342 aa9.79□□□□□ -0.84
APE1YKL103C ISW2Q08773 1120 aa9.66□□□□□ -0.86
APE1YKL103C TAF7Q05021 590 aa9.63□□□□□ -0.87
APE1YKL103C RPG1P38249 964 aaKnown RBP9.51□□□□□ -0.89
APE1YKL103C DIP2Q12220 943 aaPredicted RBP9.44□□□□□ -0.9
APE1YKL103C AVT3P36062 692 aa9.35□□□□□ -0.91
APE1YKL103C HAA1Q12753 694 aaKnown RBP9.33□□□□□ -0.92
APE1YKL103C YCK3P39962 524 aa9.25□□□□□ -0.93
APE1YKL103C TSR3Q12094 313 aaKnown RBP9.23□□□□□ -0.93
APE1YKL103C RSE1Q04693 1361 aaKnown RBP9.17□□□□□ -0.94
APE1YKL103C DMA1P38823 416 aa9.04□□□□□ -0.96
APE1YKL103C MRPL32P25348 183 aa8.95□□□□□ -0.98
APE1YKL103C LEO1P38439 464 aa8.89□□□□□ -0.99
APE1YKL103C REB1P21538 810 aa8.85□□□□□ -0.99
APE1YKL103C RPL17AP05740 184 aaKnown RBP8.85□□□□□ -0.99
APE1YKL103C RPL17BP46990 184 aaKnown RBP8.85□□□□□ -0.99
APE1YKL103C YGL015CP33199 130 aa8.64□□□□□ -1.03
APE1YKL103C SPT21P35209 758 aa8.45□□□□□ -1.06
APE1YKL103C CDC27P38042 758 aa8.39□□□□□ -1.07
APE1YKL103C YKR023WP36119 530 aaKnown RBP8.38□□□□□ -1.07
APE1YKL103C PTP3P40048 928 aa8.35□□□□□ -1.07
APE1YKL103C LEU3P08638 886 aa8.34□□□□□ -1.07
APE1YKL103C UBP10P53874 792 aaPredicted RBP8.28□□□□□ -1.08
APE1YKL103C TFC8Q12308 588 aa8.23□□□□□ -1.09
APE1YKL103C HOP09932 586 aa8.19□□□□□ -1.1
APE1YKL103C RIM101P33400 625 aa8.17□□□□□ -1.1
APE1YKL103C MAP2P38174 421 aaKnown RBP8.17□□□□□ -1.1
APE1YKL103C SAS10Q12136 610 aaPredicted RBP8.17□□□□□ -1.1
APE1YKL103C DMA2P53924 522 aa8.16□□□□□ -1.1
APE1YKL103C DCD1P06773 312 aa8.11□□□□□ -1.11
APE1YKL103C SSP1P38871 571 aa8.06□□□□□ -1.12
APE1YKL103C RPN1P38764 993 aaKnown RBP8.04□□□□□ -1.12
APE1YKL103C RLF2Q12495 606 aa8.03□□□□□ -1.12
APE1YKL103C SCY1P53009 804 aa8□□□□□ -1.13
APE1YKL103C AIM44Q99299 758 aa7.98□□□□□ -1.13
APE1YKL103C TIF4632P39936 914 aaKnown RBP7.97□□□□□ -1.13
APE1YKL103C ABP1P15891 592 aaKnown RBP7.96□□□□□ -1.14
APE1YKL103C BCH2P36122 765 aa7.95□□□□□ -1.14
APE1YKL103C SLX5P32828 619 aaKnown RBP7.94□□□□□ -1.14
APE1YKL103C BUD31P25337 157 aaPredicted RBP7.92□□□□□ -1.14
APE1YKL103C IFH1P39520 1085 aa7.92□□□□□ -1.14
APE1YKL103C TGL3P40308 642 aa7.92□□□□□ -1.14
APE1YKL103C NAP1P25293 417 aaKnown RBP7.85□□□□□ -1.15
APE1YKL103C OXP1P28273 1286 aa7.85□□□□□ -1.15
APE1YKL103C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
APE1YKL103C CKB1P43639 278 aa7.82□□□□□ -1.16
APE1YKL103C YIL055CP40523 627 aaKnown RBP7.81□□□□□ -1.16
APE1YKL103C EPS1P40557 701 aa7.75□□□□□ -1.17
APE1YKL103C UBP9P39967 754 aa7.73□□□□□ -1.17
APE1YKL103C IOC4Q04213 475 aa7.73□□□□□ -1.17
APE1YKL103C YAH1Q12184 172 aaKnown RBP7.73□□□□□ -1.17
APE1YKL103C SPB4P25808 606 aaPredicted RBP7.73□□□□□ -1.17
APE1YKL103C BDF1P35817 686 aa7.72□□□□□ -1.17
APE1YKL103C RSM7P47150 247 aa7.67□□□□□ -1.18
APE1YKL103C ORC1P54784 914 aaPredicted RBP7.67□□□□□ -1.18
APE1YKL103C YLR271WQ06152 274 aa7.67□□□□□ -1.18
APE1YKL103C BBC1P47068 1157 aa7.66□□□□□ -1.18
APE1YKL103C MGA2P40578 1113 aa7.65□□□□□ -1.18
APE1YKL103C HGH1P48362 394 aaKnown RBP7.62□□□□□ -1.19
APE1YKL103C YML020WQ03722 664 aa7.62□□□□□ -1.19
APE1YKL103C AI2P03876 854 aa7.59□□□□□ -1.19
APE1YKL103C MST1P07236 462 aa7.56□□□□□ -1.2
APE1YKL103C KIN1P13185 1064 aa7.56□□□□□ -1.2
APE1YKL103C NSR1P27476 414 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
APE1YKL103C NOP8Q08287 484 aaPredicted RBP7.55□□□□□ -1.2
APE1YKL103C SIS1P25294 352 aaKnown RBP7.54□□□□□ -1.2
APE1YKL103C VPS70P47161 811 aa7.54□□□□□ -1.2
APE1YKL103C YOR238WQ08634 303 aa7.54□□□□□ -1.2
APE1YKL103C SLX8P40072 274 aa7.51□□□□□ -1.21
APE1YKL103C YPR148CQ06523 435 aa7.5□□□□□ -1.21
APE1YKL103C SET1P38827 1080 aaKnown RBP7.49□□□□□ -1.21
APE1YKL103C CST9Q06032 482 aa7.49□□□□□ -1.21
APE1YKL103C YAP5P40574 245 aa7.48□□□□□ -1.21
APE1YKL103C YNR021WP53723 404 aaKnown RBP7.47□□□□□ -1.21
APE1YKL103C DSF2P38213 736 aa7.46□□□□□ -1.22
APE1YKL103C NOP7P53261 605 aaKnown RBP7.46□□□□□ -1.22
APE1YKL103C SSA1P10591 642 aaKnown RBP7.43□□□□□ -1.22
APE1YKL103C GEF1P37020 779 aa7.43□□□□□ -1.22
APE1YKL103C PSD2P53037 1138 aaKnown RBP7.41□□□□□ -1.22
APE1YKL103C AIM7Q12156 149 aa7.4□□□□□ -1.22
APE1YKL103C PBS2P08018 668 aa7.39□□□□□ -1.23
APE1YKL103C URN1Q06525 465 aaKnown RBP7.39□□□□□ -1.23
APE1YKL103C YBL029C-AQ3E756 94 aa7.39□□□□□ -1.23
APE1YKL103C GLC3P32775 704 aa7.38□□□□□ -1.23
APE1YKL103C RAM2P29703 316 aa7.37□□□□□ -1.23
APE1YKL103C GUA1P38625 525 aaKnown RBP7.37□□□□□ -1.23
APE1YKL103C VNX1P42839 908 aa7.35□□□□□ -1.23
APE1YKL103C SUB2Q07478 446 aaKnown RBP7.35□□□□□ -1.23
APE1YKL103C TOP1P04786 769 aa7.33□□□□□ -1.24
APE1YKL103C SNU71P53207 620 aaKnown RBP7.32□□□□□ -1.24
APE1YKL103C MAM3Q12296 706 aa7.32□□□□□ -1.24
APE1YKL103C SLD2P34252 453 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms