Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCK1P16333 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCK1P16333 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.24■□□□□ 0.99
NCK1P16333 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCK1P16333 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCK1P16333 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCK1P16333 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCK1P16333 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.23■□□□□ 0.99
NCK1P16333 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.23■□□□□ 0.99
NCK1P16333 AC087393.1-201ENST00000582896 145 ntBASIC21.23■□□□□ 0.99
NCK1P16333 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.23■□□□□ 0.99
NCK1P16333 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCK1P16333 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCK1P16333 AC131274.2-201ENST00000580697 1507 ntBASIC21.23■□□□□ 0.99
NCK1P16333 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NCK1P16333 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCK1P16333 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.22■□□□□ 0.99
NCK1P16333 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCK1P16333 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCK1P16333 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.22■□□□□ 0.99
NCK1P16333 AL592293.1-201ENST00000502889 1188 ntBASIC21.22■□□□□ 0.99
NCK1P16333 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NCK1P16333 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCK1P16333 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCK1P16333 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCK1P16333 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCK1P16333 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.21■□□□□ 0.99
NCK1P16333 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.21■□□□□ 0.99
NCK1P16333 AC242852.2-201ENST00000615738 1807 ntBASIC21.21■□□□□ 0.99
NCK1P16333 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.21■□□□□ 0.99
NCK1P16333 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.21■□□□□ 0.99
NCK1P16333 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.21■□□□□ 0.99
NCK1P16333 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
NCK1P16333 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
NCK1P16333 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.2■□□□□ 0.98
NCK1P16333 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NCK1P16333 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NCK1P16333 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NCK1P16333 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NCK1P16333 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.2■□□□□ 0.98
NCK1P16333 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCK1P16333 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCK1P16333 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.19■□□□□ 0.98
NCK1P16333 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NCK1P16333 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NCK1P16333 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
NCK1P16333 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
NCK1P16333 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCK1P16333 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.18■□□□□ 0.98
NCK1P16333 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCK1P16333 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCK1P16333 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCK1P16333 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NCK1P16333 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NCK1P16333 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCK1P16333 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCK1P16333 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NCK1P16333 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCK1P16333 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCK1P16333 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCK1P16333 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCK1P16333 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCK1P16333 AC079630.1-202ENST00000618127 1840 ntBASIC21.17■□□□□ 0.98
NCK1P16333 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.17■□□□□ 0.98
NCK1P16333 AL137060.1-201ENST00000618151 2648 ntBASIC21.16■□□□□ 0.98
NCK1P16333 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.16■□□□□ 0.98
NCK1P16333 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCK1P16333 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCK1P16333 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.16■□□□□ 0.98
NCK1P16333 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCK1P16333 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NCK1P16333 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.16■□□□□ 0.98
NCK1P16333 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.16■□□□□ 0.98
NCK1P16333 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCK1P16333 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCK1P16333 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.16■□□□□ 0.98
NCK1P16333 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCK1P16333 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.15■□□□□ 0.98
NCK1P16333 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.15■□□□□ 0.98
NCK1P16333 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.15■□□□□ 0.98
NCK1P16333 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NCK1P16333 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCK1P16333 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NCK1P16333 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms