Protein–RNA interactions for Protein: P0C7I0

USP17L8, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L8P0C7I0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 AC138932.3-201ENST00000567634 1902 ntBASIC27.33■■□□□ 1.97
USP17L8P0C7I0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L8P0C7I0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 AL161729.1-201ENST00000604104 1402 ntBASIC27.32■■□□□ 1.96
USP17L8P0C7I0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L8P0C7I0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 AL137784.2-201ENST00000607332 1000 ntBASIC27.31■■□□□ 1.96
USP17L8P0C7I0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L8P0C7I0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 SLC47A1P1-202ENST00000449666 945 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L2-201ENST00000561772 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L6-201ENST00000626483 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L1-201ENST00000627662 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L8-201ENST00000629013 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L3-201ENST00000630187 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L7-201ENST00000630678 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 DUX4L5-201ENST00000630834 1275 ntBASIC27.3■■□□□ 1.96
USP17L8P0C7I0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L8P0C7I0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L8P0C7I0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L8P0C7I0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.28■■□□□ 1.96
USP17L8P0C7I0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.28■■□□□ 1.96
USP17L8P0C7I0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.28■■□□□ 1.96
USP17L8P0C7I0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L8P0C7I0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.28■■□□□ 1.96
USP17L8P0C7I0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.27■■□□□ 1.96
USP17L8P0C7I0 AP003733.4-201ENST00000623785 1697 ntBASIC27.27■■□□□ 1.96
USP17L8P0C7I0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L8P0C7I0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.27■■□□□ 1.96
USP17L8P0C7I0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L8P0C7I0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
USP17L8P0C7I0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
USP17L8P0C7I0 AL358852.1-201ENST00000623174 1268 ntBASIC27.27■■□□□ 1.96
USP17L8P0C7I0 AC141586.4-201ENST00000624558 1573 ntBASIC27.26■■□□□ 1.96
USP17L8P0C7I0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 AC027612.3-201ENST00000413684 1047 ntBASIC27.26■■□□□ 1.95
USP17L8P0C7I0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 AC092437.1-201ENST00000624794 1048 ntBASIC27.26■■□□□ 1.95
USP17L8P0C7I0 AC142381.3-201ENST00000568208 1670 ntBASIC27.26■■□□□ 1.95
USP17L8P0C7I0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP17L8P0C7I0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.25■■□□□ 1.95
USP17L8P0C7I0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP17L8P0C7I0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.25■■□□□ 1.95
USP17L8P0C7I0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
USP17L8P0C7I0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP17L8P0C7I0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP17L8P0C7I0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms