Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO2P00403 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO2P00403 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO2P00403 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MT-CO2P00403 AL161729.1-201ENST00000604104 1402 ntBASIC18.04■□□□□ 0.48
MT-CO2P00403 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO2P00403 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-CO2P00403 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO2P00403 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
MT-CO2P00403 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-CO2P00403 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.03■□□□□ 0.48
MT-CO2P00403 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 AC011551.1-201ENST00000614101 683 ntBASIC18.03■□□□□ 0.48
MT-CO2P00403 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-CO2P00403 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MT-CO2P00403 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 AC233723.2-201ENST00000623798 2106 ntBASIC18.02■□□□□ 0.48
MT-CO2P00403 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
MT-CO2P00403 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-CO2P00403 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.02■□□□□ 0.48
MT-CO2P00403 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.02■□□□□ 0.48
MT-CO2P00403 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-CO2P00403 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.02■□□□□ 0.48
MT-CO2P00403 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-CO2P00403 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-CO2P00403 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
MT-CO2P00403 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MT-CO2P00403 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO2P00403 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO2P00403 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-CO2P00403 AC019171.1-201ENST00000601251 1056 ntBASIC18.01■□□□□ 0.47
MT-CO2P00403 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MT-CO2P00403 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO2P00403 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO2P00403 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO2P00403 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO2P00403 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-CO2P00403 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO2P00403 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO2P00403 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO2P00403 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO2P00403 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
MT-CO2P00403 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18■□□□□ 0.47
MT-CO2P00403 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO2P00403 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18■□□□□ 0.47
MT-CO2P00403 AC022616.5-201ENST00000518796 181 ntBASIC18■□□□□ 0.47
MT-CO2P00403 BHLHE23-202ENST00000612929 1109 ntBASIC18■□□□□ 0.47
MT-CO2P00403 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO2P00403 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-CO2P00403 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
MT-CO2P00403 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-CO2P00403 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MT-CO2P00403 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18■□□□□ 0.47
MT-CO2P00403 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO2P00403 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO2P00403 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO2P00403 AL022069.1-201ENST00000568025 1636 ntBASIC17.99■□□□□ 0.47
MT-CO2P00403 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-CO2P00403 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.99■□□□□ 0.47
MT-CO2P00403 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.99■□□□□ 0.47
MT-CO2P00403 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO2P00403 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-CO2P00403 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.98■□□□□ 0.47
MT-CO2P00403 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MT-CO2P00403 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MT-CO2P00403 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MT-CO2P00403 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MT-CO2P00403 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MT-CO2P00403 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
MT-CO2P00403 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
MT-CO2P00403 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.97■□□□□ 0.47
MT-CO2P00403 AC004987.1-201ENST00000428627 508 ntBASIC17.97■□□□□ 0.47
MT-CO2P00403 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-CO2P00403 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.97■□□□□ 0.47
MT-CO2P00403 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.97■□□□□ 0.47
MT-CO2P00403 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.97■□□□□ 0.47
MT-CO2P00403 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-CO2P00403 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-CO2P00403 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms