Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RCCD1A6NED2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RCCD1A6NED2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RCCD1A6NED2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RCCD1A6NED2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RCCD1A6NED2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RCCD1A6NED2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RCCD1A6NED2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.01■■□□□ 1.43
RCCD1A6NED2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.01■■□□□ 1.43
RCCD1A6NED2 AC127496.7-201ENST00000625110 1798 ntBASIC24.01■■□□□ 1.43
RCCD1A6NED2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24■■□□□ 1.43
RCCD1A6NED2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 LBH-205ENST00000407930 756 ntTSL 2 BASIC24■■□□□ 1.43
RCCD1A6NED2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24■■□□□ 1.43
RCCD1A6NED2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24■■□□□ 1.43
RCCD1A6NED2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RCCD1A6NED2 AF131216.4-201ENST00000638924 1588 ntBASIC23.99■■□□□ 1.43
RCCD1A6NED2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RCCD1A6NED2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.99■■□□□ 1.43
RCCD1A6NED2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.99■■□□□ 1.43
RCCD1A6NED2 AC019171.1-201ENST00000601251 1056 ntBASIC23.99■■□□□ 1.43
RCCD1A6NED2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RCCD1A6NED2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.99■■□□□ 1.43
RCCD1A6NED2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RCCD1A6NED2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.98■■□□□ 1.43
RCCD1A6NED2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
RCCD1A6NED2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RCCD1A6NED2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.98■■□□□ 1.43
RCCD1A6NED2 AC007375.3-201ENST00000600936 2314 ntBASIC23.98■■□□□ 1.43
RCCD1A6NED2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.98■■□□□ 1.43
RCCD1A6NED2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RCCD1A6NED2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.98■■□□□ 1.43
RCCD1A6NED2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RCCD1A6NED2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RCCD1A6NED2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
RCCD1A6NED2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RCCD1A6NED2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RCCD1A6NED2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RCCD1A6NED2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RCCD1A6NED2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RCCD1A6NED2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.97■■□□□ 1.43
RCCD1A6NED2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RCCD1A6NED2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.97■■□□□ 1.43
RCCD1A6NED2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RCCD1A6NED2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.96■■□□□ 1.43
RCCD1A6NED2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.96■■□□□ 1.43
RCCD1A6NED2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 DUX4L18-201ENST00000553347 1267 ntBASIC23.96■■□□□ 1.43
RCCD1A6NED2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.96■■□□□ 1.43
RCCD1A6NED2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RCCD1A6NED2 AC242852.2-201ENST00000615738 1807 ntBASIC23.96■■□□□ 1.43
RCCD1A6NED2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
RCCD1A6NED2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RCCD1A6NED2 AC137767.1-201ENST00000602918 1920 ntBASIC23.95■■□□□ 1.42
RCCD1A6NED2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RCCD1A6NED2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.95■■□□□ 1.42
RCCD1A6NED2 AC120024.1-201ENST00000562672 995 ntBASIC23.95■■□□□ 1.42
RCCD1A6NED2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.95■■□□□ 1.42
RCCD1A6NED2 HSD17B1P1-201ENST00000590052 955 ntBASIC23.95■■□□□ 1.42
RCCD1A6NED2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RCCD1A6NED2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RCCD1A6NED2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RCCD1A6NED2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.95■■□□□ 1.42
RCCD1A6NED2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.94■■□□□ 1.42
RCCD1A6NED2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RCCD1A6NED2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RCCD1A6NED2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RCCD1A6NED2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RCCD1A6NED2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.93■■□□□ 1.42
RCCD1A6NED2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.93■■□□□ 1.42
RCCD1A6NED2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RCCD1A6NED2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RCCD1A6NED2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RCCD1A6NED2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RCCD1A6NED2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.93■■□□□ 1.42
RCCD1A6NED2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.93■■□□□ 1.42
RCCD1A6NED2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.93■■□□□ 1.42
RCCD1A6NED2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.93■■□□□ 1.42
RCCD1A6NED2 AC022616.5-201ENST00000518796 181 ntBASIC23.93■■□□□ 1.42
RCCD1A6NED2 ESRRAP2-201ENST00000418437 1549 ntBASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms