Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 KRT18P60-201ENST00000312876 1297 ntBASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA13Q9Y5I0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.14■■□□□ 1.46
PCDHA13Q9Y5I0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA13Q9Y5I0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA13Q9Y5I0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA13Q9Y5I0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 ECEL1P1-201ENST00000373592 1742 ntBASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 AC019171.1-201ENST00000601251 1056 ntBASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA13Q9Y5I0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA13Q9Y5I0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 AC022616.5-201ENST00000518796 181 ntBASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA13Q9Y5I0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA13Q9Y5I0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 AC079630.1-202ENST00000618127 1840 ntBASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PCDHA13Q9Y5I0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHA13Q9Y5I0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHA13Q9Y5I0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA13Q9Y5I0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHA13Q9Y5I0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PCDHA13Q9Y5I0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHA13Q9Y5I0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHA13Q9Y5I0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.05■■□□□ 1.44
PCDHA13Q9Y5I0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms